Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ClppO88696 Gm22325-201ENSMUST00000158904 308 ntBASIC17.38■□□□□ 0.37
ClppO88696 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.38■□□□□ 0.37
ClppO88696 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ClppO88696 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ClppO88696 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ClppO88696 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ClppO88696 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ClppO88696 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ClppO88696 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ClppO88696 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ClppO88696 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.37■□□□□ 0.37
ClppO88696 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
ClppO88696 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.37■□□□□ 0.37
ClppO88696 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.37■□□□□ 0.37
ClppO88696 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
ClppO88696 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ClppO88696 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ClppO88696 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
ClppO88696 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ClppO88696 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ClppO88696 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ClppO88696 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ClppO88696 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ClppO88696 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ClppO88696 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ClppO88696 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
ClppO88696 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ClppO88696 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ClppO88696 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ClppO88696 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ClppO88696 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ClppO88696 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ClppO88696 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ClppO88696 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.36■□□□□ 0.37
ClppO88696 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.36■□□□□ 0.37
ClppO88696 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ClppO88696 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ClppO88696 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.36■□□□□ 0.37
ClppO88696 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.35■□□□□ 0.37
ClppO88696 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ClppO88696 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ClppO88696 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
ClppO88696 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
ClppO88696 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ClppO88696 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ClppO88696 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ClppO88696 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ClppO88696 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.35■□□□□ 0.37
ClppO88696 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.35■□□□□ 0.37
ClppO88696 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.35■□□□□ 0.37
ClppO88696 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.35■□□□□ 0.37
ClppO88696 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
ClppO88696 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.35■□□□□ 0.37
ClppO88696 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ClppO88696 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ClppO88696 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ClppO88696 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ClppO88696 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ClppO88696 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
ClppO88696 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ClppO88696 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ClppO88696 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ClppO88696 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.34■□□□□ 0.37
ClppO88696 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.34■□□□□ 0.37
ClppO88696 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.34■□□□□ 0.37
ClppO88696 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.34■□□□□ 0.37
ClppO88696 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.34■□□□□ 0.37
ClppO88696 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ClppO88696 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ClppO88696 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ClppO88696 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ClppO88696 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.34■□□□□ 0.37
ClppO88696 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ClppO88696 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.33■□□□□ 0.37
ClppO88696 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ClppO88696 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.33■□□□□ 0.37
ClppO88696 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ClppO88696 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
ClppO88696 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.33■□□□□ 0.37
ClppO88696 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ClppO88696 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.33■□□□□ 0.36
ClppO88696 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ClppO88696 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ClppO88696 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.33■□□□□ 0.36
ClppO88696 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ClppO88696 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ClppO88696 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ClppO88696 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ClppO88696 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.33■□□□□ 0.36
ClppO88696 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ClppO88696 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ClppO88696 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.33■□□□□ 0.36
ClppO88696 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ClppO88696 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ClppO88696 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
ClppO88696 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.32■□□□□ 0.36
ClppO88696 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
ClppO88696 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.32■□□□□ 0.36
ClppO88696 Mir6982-201ENSMUST00000184354 68 ntBASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms