Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdlim3O70209 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdlim3O70209 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdlim3O70209 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pdlim3O70209 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Pdlim3O70209 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Pdlim3O70209 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pdlim3O70209 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Pdlim3O70209 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pdlim3O70209 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pdlim3O70209 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Pdlim3O70209 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pdlim3O70209 Gm13534-201ENSMUST00000121169 513 ntBASIC16.24■□□□□ 0.19
Pdlim3O70209 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.24■□□□□ 0.19
Pdlim3O70209 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Pdlim3O70209 Gm45417-201ENSMUST00000209533 758 ntBASIC16.24■□□□□ 0.19
Pdlim3O70209 Gm9988-201ENSMUST00000069786 435 ntBASIC16.24■□□□□ 0.19
Pdlim3O70209 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pdlim3O70209 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pdlim3O70209 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pdlim3O70209 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Pdlim3O70209 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Pdlim3O70209 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Pdlim3O70209 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pdlim3O70209 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pdlim3O70209 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pdlim3O70209 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pdlim3O70209 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Pdlim3O70209 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pdlim3O70209 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Pdlim3O70209 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pdlim3O70209 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pdlim3O70209 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pdlim3O70209 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pdlim3O70209 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pdlim3O70209 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Pdlim3O70209 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pdlim3O70209 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pdlim3O70209 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pdlim3O70209 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pdlim3O70209 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pdlim3O70209 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pdlim3O70209 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pdlim3O70209 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pdlim3O70209 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pdlim3O70209 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pdlim3O70209 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.22■□□□□ 0.19
Pdlim3O70209 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pdlim3O70209 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pdlim3O70209 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pdlim3O70209 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.22■□□□□ 0.19
Pdlim3O70209 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pdlim3O70209 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pdlim3O70209 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pdlim3O70209 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdlim3O70209 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Pdlim3O70209 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdlim3O70209 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Pdlim3O70209 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdlim3O70209 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdlim3O70209 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdlim3O70209 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdlim3O70209 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Pdlim3O70209 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pdlim3O70209 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Pdlim3O70209 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
Pdlim3O70209 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.21■□□□□ 0.19
Pdlim3O70209 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdlim3O70209 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.21■□□□□ 0.19
Pdlim3O70209 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pdlim3O70209 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdlim3O70209 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdlim3O70209 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pdlim3O70209 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pdlim3O70209 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.21■□□□□ 0.18
Pdlim3O70209 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pdlim3O70209 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdlim3O70209 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pdlim3O70209 Reep4-203ENSMUST00000226563 1444 ntBASIC16.2■□□□□ 0.18
Pdlim3O70209 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdlim3O70209 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.2■□□□□ 0.18
Pdlim3O70209 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pdlim3O70209 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pdlim3O70209 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pdlim3O70209 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC16.2■□□□□ 0.18
Pdlim3O70209 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdlim3O70209 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdlim3O70209 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Pdlim3O70209 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Pdlim3O70209 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdlim3O70209 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdlim3O70209 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pdlim3O70209 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.2■□□□□ 0.18
Pdlim3O70209 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pdlim3O70209 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdlim3O70209 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pdlim3O70209 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdlim3O70209 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdlim3O70209 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pdlim3O70209 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms