Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ldb2O55203 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ldb2O55203 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ldb2O55203 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ldb2O55203 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ldb2O55203 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ldb2O55203 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ldb2O55203 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ldb2O55203 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ldb2O55203 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ldb2O55203 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ldb2O55203 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ldb2O55203 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ldb2O55203 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ldb2O55203 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.78■□□□□ 0.44
Ldb2O55203 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ldb2O55203 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.78■□□□□ 0.44
Ldb2O55203 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ldb2O55203 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ldb2O55203 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ldb2O55203 Idnk-204ENSMUST00000226010 1898 ntBASIC17.78■□□□□ 0.44
Ldb2O55203 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ldb2O55203 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Ldb2O55203 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ldb2O55203 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ldb2O55203 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Ldb2O55203 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ldb2O55203 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ldb2O55203 Gm12527-201ENSMUST00000117967 564 ntBASIC17.77■□□□□ 0.44
Ldb2O55203 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ldb2O55203 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ldb2O55203 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.77■□□□□ 0.44
Ldb2O55203 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.77■□□□□ 0.44
Ldb2O55203 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ldb2O55203 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ldb2O55203 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ldb2O55203 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ldb2O55203 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.77■□□□□ 0.44
Ldb2O55203 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
Ldb2O55203 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ldb2O55203 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ldb2O55203 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ldb2O55203 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Ldb2O55203 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ldb2O55203 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Ldb2O55203 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.76■□□□□ 0.43
Ldb2O55203 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ldb2O55203 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ldb2O55203 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.76■□□□□ 0.43
Ldb2O55203 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.76■□□□□ 0.43
Ldb2O55203 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.76■□□□□ 0.43
Ldb2O55203 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ldb2O55203 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ldb2O55203 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ldb2O55203 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ldb2O55203 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ldb2O55203 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.75■□□□□ 0.43
Ldb2O55203 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ldb2O55203 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.75■□□□□ 0.43
Ldb2O55203 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ldb2O55203 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.75■□□□□ 0.43
Ldb2O55203 Mir2861-201ENSMUST00000175539 82 ntBASIC17.75■□□□□ 0.43
Ldb2O55203 Gm27275-201ENSMUST00000184318 272 ntBASIC17.75■□□□□ 0.43
Ldb2O55203 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.75■□□□□ 0.43
Ldb2O55203 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ldb2O55203 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ldb2O55203 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ldb2O55203 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ldb2O55203 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ldb2O55203 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ldb2O55203 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.75■□□□□ 0.43
Ldb2O55203 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ldb2O55203 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.74■□□□□ 0.43
Ldb2O55203 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ldb2O55203 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
Ldb2O55203 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.74■□□□□ 0.43
Ldb2O55203 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Ldb2O55203 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.74■□□□□ 0.43
Ldb2O55203 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ldb2O55203 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ldb2O55203 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.74■□□□□ 0.43
Ldb2O55203 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ldb2O55203 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.74■□□□□ 0.43
Ldb2O55203 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ldb2O55203 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ldb2O55203 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ldb2O55203 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ldb2O55203 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.73■□□□□ 0.43
Ldb2O55203 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ldb2O55203 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ldb2O55203 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ldb2O55203 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ldb2O55203 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ldb2O55203 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ldb2O55203 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ldb2O55203 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ldb2O55203 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.73■□□□□ 0.43
Ldb2O55203 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Ldb2O55203 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ldb2O55203 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms