Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pja1O55176 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pja1O55176 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pja1O55176 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Pja1O55176 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pja1O55176 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pja1O55176 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pja1O55176 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pja1O55176 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pja1O55176 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pja1O55176 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Pja1O55176 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pja1O55176 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pja1O55176 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pja1O55176 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pja1O55176 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pja1O55176 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Pja1O55176 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pja1O55176 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pja1O55176 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pja1O55176 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pja1O55176 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pja1O55176 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pja1O55176 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pja1O55176 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pja1O55176 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pja1O55176 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pja1O55176 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pja1O55176 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Pja1O55176 Gm42778-201ENSMUST00000199644 553 ntBASIC18.88■□□□□ 0.61
Pja1O55176 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Pja1O55176 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pja1O55176 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pja1O55176 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pja1O55176 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pja1O55176 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pja1O55176 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Pja1O55176 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pja1O55176 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pja1O55176 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pja1O55176 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pja1O55176 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Pja1O55176 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.88■□□□□ 0.61
Pja1O55176 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pja1O55176 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pja1O55176 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.88■□□□□ 0.61
Pja1O55176 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pja1O55176 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pja1O55176 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pja1O55176 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pja1O55176 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.87■□□□□ 0.61
Pja1O55176 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Pja1O55176 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pja1O55176 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.87■□□□□ 0.61
Pja1O55176 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.87■□□□□ 0.61
Pja1O55176 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.87■□□□□ 0.61
Pja1O55176 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.87■□□□□ 0.61
Pja1O55176 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pja1O55176 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pja1O55176 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pja1O55176 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pja1O55176 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pja1O55176 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.86■□□□□ 0.61
Pja1O55176 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.86■□□□□ 0.61
Pja1O55176 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.86■□□□□ 0.61
Pja1O55176 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pja1O55176 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pja1O55176 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pja1O55176 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.86■□□□□ 0.61
Pja1O55176 Gm10033-202ENSMUST00000211874 928 ntBASIC18.86■□□□□ 0.61
Pja1O55176 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.86■□□□□ 0.61
Pja1O55176 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pja1O55176 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.86■□□□□ 0.61
Pja1O55176 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pja1O55176 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pja1O55176 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pja1O55176 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pja1O55176 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pja1O55176 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pja1O55176 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pja1O55176 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.85■□□□□ 0.61
Pja1O55176 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
Pja1O55176 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.85■□□□□ 0.61
Pja1O55176 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.85■□□□□ 0.61
Pja1O55176 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pja1O55176 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pja1O55176 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.85■□□□□ 0.61
Pja1O55176 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pja1O55176 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pja1O55176 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pja1O55176 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pja1O55176 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pja1O55176 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.85■□□□□ 0.61
Pja1O55176 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Pja1O55176 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pja1O55176 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pja1O55176 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pja1O55176 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pja1O55176 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pja1O55176 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms