Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Kcnu1O54982 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.03■□□□□ 0.64
Kcnu1O54982 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Kcnu1O54982 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Kcnu1O54982 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Kcnu1O54982 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Kcnu1O54982 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Kcnu1O54982 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Kcnu1O54982 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Kcnu1O54982 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Kcnu1O54982 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Kcnu1O54982 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Kcnu1O54982 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Kcnu1O54982 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Kcnu1O54982 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Kcnu1O54982 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Kcnu1O54982 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.02■□□□□ 0.64
Kcnu1O54982 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Kcnu1O54982 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Kcnu1O54982 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
Kcnu1O54982 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Kcnu1O54982 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Kcnu1O54982 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.02■□□□□ 0.64
Kcnu1O54982 Rab3c-203ENSMUST00000224180 967 ntBASIC19.02■□□□□ 0.64
Kcnu1O54982 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.02■□□□□ 0.64
Kcnu1O54982 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Kcnu1O54982 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.02■□□□□ 0.64
Kcnu1O54982 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Kcnu1O54982 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Kcnu1O54982 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Kcnu1O54982 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Kcnu1O54982 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Kcnu1O54982 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Kcnu1O54982 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Kcnu1O54982 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Kcnu1O54982 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.02■□□□□ 0.63
Kcnu1O54982 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Kcnu1O54982 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Kcnu1O54982 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.01■□□□□ 0.63
Kcnu1O54982 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Kcnu1O54982 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Kcnu1O54982 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Kcnu1O54982 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.01■□□□□ 0.63
Kcnu1O54982 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Kcnu1O54982 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Kcnu1O54982 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Kcnu1O54982 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Kcnu1O54982 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Kcnu1O54982 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Kcnu1O54982 Zfp783-201ENSMUST00000095946 670 ntBASIC19.01■□□□□ 0.63
Kcnu1O54982 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Kcnu1O54982 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Kcnu1O54982 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Kcnu1O54982 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Kcnu1O54982 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Kcnu1O54982 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Kcnu1O54982 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Kcnu1O54982 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Kcnu1O54982 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19■□□□□ 0.63
Kcnu1O54982 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Kcnu1O54982 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Kcnu1O54982 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Kcnu1O54982 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Kcnu1O54982 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19■□□□□ 0.63
Kcnu1O54982 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Kcnu1O54982 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Kcnu1O54982 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Kcnu1O54982 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19■□□□□ 0.63
Kcnu1O54982 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Kcnu1O54982 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Kcnu1O54982 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Kcnu1O54982 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Kcnu1O54982 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.99■□□□□ 0.63
Kcnu1O54982 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Kcnu1O54982 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.99■□□□□ 0.63
Kcnu1O54982 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Kcnu1O54982 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Kcnu1O54982 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Kcnu1O54982 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.99■□□□□ 0.63
Kcnu1O54982 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Kcnu1O54982 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Kcnu1O54982 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Kcnu1O54982 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Kcnu1O54982 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Kcnu1O54982 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Kcnu1O54982 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Kcnu1O54982 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Kcnu1O54982 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Kcnu1O54982 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Kcnu1O54982 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.98■□□□□ 0.63
Kcnu1O54982 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Kcnu1O54982 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Kcnu1O54982 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Kcnu1O54982 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Kcnu1O54982 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.98■□□□□ 0.63
Kcnu1O54982 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Kcnu1O54982 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Kcnu1O54982 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Kcnu1O54982 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Kcnu1O54982 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms