Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cldn5O54942 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Cldn5O54942 Gm11643-201ENSMUST00000119578 864 ntBASIC18.56■□□□□ 0.56
Cldn5O54942 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Cldn5O54942 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Cldn5O54942 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cldn5O54942 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cldn5O54942 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Cldn5O54942 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cldn5O54942 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.56■□□□□ 0.56
Cldn5O54942 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.56■□□□□ 0.56
Cldn5O54942 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Cldn5O54942 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cldn5O54942 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cldn5O54942 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cldn5O54942 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cldn5O54942 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.55■□□□□ 0.56
Cldn5O54942 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cldn5O54942 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cldn5O54942 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cldn5O54942 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cldn5O54942 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cldn5O54942 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Cldn5O54942 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cldn5O54942 Mir5122-201ENSMUST00000175004 89 ntBASIC18.55■□□□□ 0.56
Cldn5O54942 Gm37055-201ENSMUST00000191866 133 ntBASIC18.55■□□□□ 0.56
Cldn5O54942 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cldn5O54942 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cldn5O54942 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Cldn5O54942 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Cldn5O54942 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cldn5O54942 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.55■□□□□ 0.56
Cldn5O54942 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cldn5O54942 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.55■□□□□ 0.56
Cldn5O54942 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cldn5O54942 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Cldn5O54942 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cldn5O54942 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cldn5O54942 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cldn5O54942 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cldn5O54942 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cldn5O54942 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cldn5O54942 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cldn5O54942 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.54■□□□□ 0.56
Cldn5O54942 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cldn5O54942 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.54■□□□□ 0.56
Cldn5O54942 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cldn5O54942 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cldn5O54942 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cldn5O54942 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cldn5O54942 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cldn5O54942 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.53■□□□□ 0.56
Cldn5O54942 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cldn5O54942 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cldn5O54942 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.53■□□□□ 0.56
Cldn5O54942 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.53■□□□□ 0.56
Cldn5O54942 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cldn5O54942 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cldn5O54942 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Cldn5O54942 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cldn5O54942 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cldn5O54942 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cldn5O54942 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.53■□□□□ 0.56
Cldn5O54942 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cldn5O54942 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Cldn5O54942 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Cldn5O54942 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cldn5O54942 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cldn5O54942 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.53■□□□□ 0.56
Cldn5O54942 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.53■□□□□ 0.56
Cldn5O54942 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cldn5O54942 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cldn5O54942 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.52■□□□□ 0.56
Cldn5O54942 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cldn5O54942 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cldn5O54942 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Cldn5O54942 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Cldn5O54942 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.52■□□□□ 0.56
Cldn5O54942 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cldn5O54942 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Cldn5O54942 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Cldn5O54942 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
Cldn5O54942 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
Cldn5O54942 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cldn5O54942 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cldn5O54942 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cldn5O54942 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Cldn5O54942 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cldn5O54942 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cldn5O54942 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.51■□□□□ 0.55
Cldn5O54942 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Cldn5O54942 Gm10418-201ENSMUST00000100943 576 ntBASIC18.51■□□□□ 0.55
Cldn5O54942 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.51■□□□□ 0.55
Cldn5O54942 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cldn5O54942 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Cldn5O54942 Mir7071-201ENSMUST00000184847 69 ntBASIC18.51■□□□□ 0.55
Cldn5O54942 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cldn5O54942 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Cldn5O54942 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cldn5O54942 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms