Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ChkaO54804 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ChkaO54804 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ChkaO54804 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ChkaO54804 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ChkaO54804 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ChkaO54804 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.04■□□□□ 0.48
ChkaO54804 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ChkaO54804 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ChkaO54804 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
ChkaO54804 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ChkaO54804 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.04■□□□□ 0.48
ChkaO54804 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ChkaO54804 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ChkaO54804 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ChkaO54804 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
ChkaO54804 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ChkaO54804 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ChkaO54804 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ChkaO54804 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ChkaO54804 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ChkaO54804 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.03■□□□□ 0.48
ChkaO54804 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ChkaO54804 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.03■□□□□ 0.48
ChkaO54804 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ChkaO54804 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ChkaO54804 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ChkaO54804 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ChkaO54804 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ChkaO54804 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ChkaO54804 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ChkaO54804 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ChkaO54804 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ChkaO54804 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ChkaO54804 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.02■□□□□ 0.48
ChkaO54804 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.02■□□□□ 0.48
ChkaO54804 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ChkaO54804 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ChkaO54804 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ChkaO54804 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ChkaO54804 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ChkaO54804 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
ChkaO54804 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
ChkaO54804 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.02■□□□□ 0.47
ChkaO54804 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ChkaO54804 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ChkaO54804 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.02■□□□□ 0.47
ChkaO54804 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ChkaO54804 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ChkaO54804 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ChkaO54804 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ChkaO54804 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ChkaO54804 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.01■□□□□ 0.47
ChkaO54804 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ChkaO54804 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
ChkaO54804 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ChkaO54804 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ChkaO54804 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
ChkaO54804 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
ChkaO54804 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ChkaO54804 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ChkaO54804 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ChkaO54804 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
ChkaO54804 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18■□□□□ 0.47
ChkaO54804 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ChkaO54804 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
ChkaO54804 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
ChkaO54804 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
ChkaO54804 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18■□□□□ 0.47
ChkaO54804 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18■□□□□ 0.47
ChkaO54804 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
ChkaO54804 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18■□□□□ 0.47
ChkaO54804 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ChkaO54804 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ChkaO54804 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18■□□□□ 0.47
ChkaO54804 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
ChkaO54804 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ChkaO54804 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ChkaO54804 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.99■□□□□ 0.47
ChkaO54804 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ChkaO54804 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ChkaO54804 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ChkaO54804 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.99■□□□□ 0.47
ChkaO54804 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.99■□□□□ 0.47
ChkaO54804 Gm6211-202ENSMUST00000167849 925 ntBASIC17.99■□□□□ 0.47
ChkaO54804 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ChkaO54804 Gm27405-201ENSMUST00000184201 112 ntBASIC17.99■□□□□ 0.47
ChkaO54804 Gm8969-201ENSMUST00000199694 526 ntBASIC17.99■□□□□ 0.47
ChkaO54804 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ChkaO54804 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ChkaO54804 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ChkaO54804 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ChkaO54804 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ChkaO54804 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
ChkaO54804 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ChkaO54804 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
ChkaO54804 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ChkaO54804 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ChkaO54804 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.98■□□□□ 0.47
ChkaO54804 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms