Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Slc1a6O35544 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Slc1a6O35544 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Slc1a6O35544 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc1a6O35544 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc1a6O35544 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc1a6O35544 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Slc1a6O35544 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Slc1a6O35544 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Slc1a6O35544 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc1a6O35544 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc1a6O35544 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.64■□□□□ 0.41
Slc1a6O35544 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc1a6O35544 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Slc1a6O35544 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc1a6O35544 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.64■□□□□ 0.41
Slc1a6O35544 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc1a6O35544 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Slc1a6O35544 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Slc1a6O35544 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.64■□□□□ 0.41
Slc1a6O35544 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc1a6O35544 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc1a6O35544 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.64■□□□□ 0.41
Slc1a6O35544 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Slc1a6O35544 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Slc1a6O35544 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc1a6O35544 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc1a6O35544 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Slc1a6O35544 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc1a6O35544 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.63■□□□□ 0.41
Slc1a6O35544 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc1a6O35544 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc1a6O35544 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc1a6O35544 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc1a6O35544 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Slc1a6O35544 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Slc1a6O35544 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Slc1a6O35544 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc1a6O35544 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc1a6O35544 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
Slc1a6O35544 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Slc1a6O35544 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc1a6O35544 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc1a6O35544 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc1a6O35544 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Slc1a6O35544 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc1a6O35544 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc1a6O35544 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc1a6O35544 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.62■□□□□ 0.41
Slc1a6O35544 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.62■□□□□ 0.41
Slc1a6O35544 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Slc1a6O35544 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc1a6O35544 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Slc1a6O35544 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.62■□□□□ 0.41
Slc1a6O35544 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc1a6O35544 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc1a6O35544 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
Slc1a6O35544 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc1a6O35544 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc1a6O35544 Reep4-203ENSMUST00000226563 1444 ntBASIC17.62■□□□□ 0.41
Slc1a6O35544 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc1a6O35544 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Slc1a6O35544 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Slc1a6O35544 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc1a6O35544 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc1a6O35544 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.62■□□□□ 0.41
Slc1a6O35544 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Slc1a6O35544 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc1a6O35544 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Slc1a6O35544 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Slc1a6O35544 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc1a6O35544 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Slc1a6O35544 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc1a6O35544 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc1a6O35544 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Slc1a6O35544 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Slc1a6O35544 Gm9988-201ENSMUST00000069786 435 ntBASIC17.61■□□□□ 0.41
Slc1a6O35544 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Slc1a6O35544 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.61■□□□□ 0.41
Slc1a6O35544 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.61■□□□□ 0.41
Slc1a6O35544 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Slc1a6O35544 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Slc1a6O35544 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc1a6O35544 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Slc1a6O35544 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc1a6O35544 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc1a6O35544 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.61■□□□□ 0.41
Slc1a6O35544 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc1a6O35544 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Slc1a6O35544 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc1a6O35544 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc1a6O35544 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc1a6O35544 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Slc1a6O35544 Gm45417-201ENSMUST00000209533 758 ntBASIC17.6■□□□□ 0.41
Slc1a6O35544 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.6■□□□□ 0.41
Slc1a6O35544 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc1a6O35544 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc1a6O35544 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Slc1a6O35544 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.6■□□□□ 0.41
Slc1a6O35544 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 99 ms