Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.36■□□□□ 0.69
Ube3aO08759 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ube3aO08759 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ube3aO08759 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ube3aO08759 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ube3aO08759 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Ube3aO08759 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ube3aO08759 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.35■□□□□ 0.69
Ube3aO08759 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ube3aO08759 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ube3aO08759 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Ube3aO08759 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.35■□□□□ 0.69
Ube3aO08759 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ube3aO08759 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ube3aO08759 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ube3aO08759 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ube3aO08759 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
Ube3aO08759 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ube3aO08759 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.34■□□□□ 0.69
Ube3aO08759 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ube3aO08759 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ube3aO08759 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ube3aO08759 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ube3aO08759 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ube3aO08759 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ube3aO08759 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ube3aO08759 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ube3aO08759 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Ube3aO08759 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Ube3aO08759 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ube3aO08759 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ube3aO08759 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ube3aO08759 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ube3aO08759 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ube3aO08759 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.69
Ube3aO08759 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ube3aO08759 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ube3aO08759 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ube3aO08759 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
Ube3aO08759 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ube3aO08759 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ube3aO08759 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.33■□□□□ 0.68
Ube3aO08759 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Ube3aO08759 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ube3aO08759 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Ube3aO08759 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
Ube3aO08759 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ube3aO08759 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ube3aO08759 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ube3aO08759 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube3aO08759 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.32■□□□□ 0.68
Ube3aO08759 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube3aO08759 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube3aO08759 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube3aO08759 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.32■□□□□ 0.68
Ube3aO08759 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube3aO08759 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.32■□□□□ 0.68
Ube3aO08759 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube3aO08759 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube3aO08759 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube3aO08759 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube3aO08759 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube3aO08759 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube3aO08759 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube3aO08759 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube3aO08759 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.31■□□□□ 0.68
Ube3aO08759 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ube3aO08759 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ube3aO08759 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ube3aO08759 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Ube3aO08759 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.31■□□□□ 0.68
Ube3aO08759 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ube3aO08759 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.31■□□□□ 0.68
Ube3aO08759 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Ube3aO08759 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ube3aO08759 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ube3aO08759 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ube3aO08759 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Ube3aO08759 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ube3aO08759 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ube3aO08759 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ube3aO08759 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ube3aO08759 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ube3aO08759 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ube3aO08759 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ube3aO08759 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ube3aO08759 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ube3aO08759 Gm13146-201ENSMUST00000118508 780 ntBASIC19.3■□□□□ 0.68
Ube3aO08759 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ube3aO08759 Gm43060-201ENSMUST00000200621 289 ntBASIC19.3■□□□□ 0.68
Ube3aO08759 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.3■□□□□ 0.68
Ube3aO08759 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ube3aO08759 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.3■□□□□ 0.68
Ube3aO08759 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ube3aO08759 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Ube3aO08759 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ube3aO08759 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ube3aO08759 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ube3aO08759 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ube3aO08759 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms