Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Polr2jO08740 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Polr2jO08740 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Polr2jO08740 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Polr2jO08740 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Polr2jO08740 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Polr2jO08740 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Polr2jO08740 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Polr2jO08740 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Polr2jO08740 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Polr2jO08740 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Polr2jO08740 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Polr2jO08740 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Polr2jO08740 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.17■□□□□ 0.34
Polr2jO08740 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Polr2jO08740 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Polr2jO08740 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Polr2jO08740 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.17■□□□□ 0.34
Polr2jO08740 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Polr2jO08740 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Polr2jO08740 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Polr2jO08740 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Polr2jO08740 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Polr2jO08740 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Polr2jO08740 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Polr2jO08740 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Polr2jO08740 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Polr2jO08740 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Polr2jO08740 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2jO08740 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2jO08740 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.16■□□□□ 0.34
Polr2jO08740 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2jO08740 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2jO08740 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2jO08740 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2jO08740 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.16■□□□□ 0.34
Polr2jO08740 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2jO08740 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2jO08740 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2jO08740 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2jO08740 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.15■□□□□ 0.34
Polr2jO08740 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2jO08740 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2jO08740 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2jO08740 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2jO08740 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2jO08740 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2jO08740 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2jO08740 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2jO08740 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2jO08740 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Polr2jO08740 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2jO08740 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2jO08740 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2jO08740 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2jO08740 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2jO08740 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2jO08740 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2jO08740 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.14■□□□□ 0.34
Polr2jO08740 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr2jO08740 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.14■□□□□ 0.33
Polr2jO08740 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr2jO08740 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr2jO08740 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Polr2jO08740 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr2jO08740 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Polr2jO08740 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr2jO08740 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr2jO08740 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr2jO08740 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr2jO08740 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr2jO08740 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr2jO08740 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr2jO08740 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr2jO08740 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr2jO08740 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr2jO08740 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr2jO08740 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr2jO08740 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Polr2jO08740 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Polr2jO08740 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.13■□□□□ 0.33
Polr2jO08740 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Polr2jO08740 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.13■□□□□ 0.33
Polr2jO08740 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Polr2jO08740 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Polr2jO08740 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Polr2jO08740 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Polr2jO08740 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Polr2jO08740 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.13■□□□□ 0.33
Polr2jO08740 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.13■□□□□ 0.33
Polr2jO08740 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Polr2jO08740 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Polr2jO08740 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.13■□□□□ 0.33
Polr2jO08740 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Polr2jO08740 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Polr2jO08740 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Polr2jO08740 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Polr2jO08740 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Polr2jO08740 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Polr2jO08740 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms