Protein–RNA interactions for Protein: O08547

Sec22b, Vesicle-trafficking protein SEC22b, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec22bO08547 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sec22bO08547 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sec22bO08547 Gm10849-201ENSMUST00000100397 618 ntBASIC17.69■□□□□ 0.42
Sec22bO08547 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.69■□□□□ 0.42
Sec22bO08547 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sec22bO08547 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.69■□□□□ 0.42
Sec22bO08547 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Sec22bO08547 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sec22bO08547 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sec22bO08547 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.69■□□□□ 0.42
Sec22bO08547 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sec22bO08547 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Sec22bO08547 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.68■□□□□ 0.42
Sec22bO08547 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sec22bO08547 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sec22bO08547 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Sec22bO08547 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sec22bO08547 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Sec22bO08547 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sec22bO08547 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sec22bO08547 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sec22bO08547 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sec22bO08547 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sec22bO08547 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sec22bO08547 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.67■□□□□ 0.42
Sec22bO08547 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sec22bO08547 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.67■□□□□ 0.42
Sec22bO08547 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sec22bO08547 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Sec22bO08547 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.67■□□□□ 0.42
Sec22bO08547 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sec22bO08547 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sec22bO08547 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sec22bO08547 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sec22bO08547 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sec22bO08547 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sec22bO08547 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sec22bO08547 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
Sec22bO08547 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sec22bO08547 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sec22bO08547 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sec22bO08547 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sec22bO08547 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.66■□□□□ 0.42
Sec22bO08547 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sec22bO08547 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sec22bO08547 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sec22bO08547 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sec22bO08547 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sec22bO08547 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sec22bO08547 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sec22bO08547 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sec22bO08547 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sec22bO08547 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Sec22bO08547 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sec22bO08547 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Sec22bO08547 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.65■□□□□ 0.42
Sec22bO08547 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sec22bO08547 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sec22bO08547 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sec22bO08547 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sec22bO08547 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sec22bO08547 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sec22bO08547 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sec22bO08547 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sec22bO08547 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sec22bO08547 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sec22bO08547 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sec22bO08547 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sec22bO08547 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sec22bO08547 Gm7291-201ENSMUST00000199147 382 ntBASIC17.64■□□□□ 0.41
Sec22bO08547 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.64■□□□□ 0.41
Sec22bO08547 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sec22bO08547 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Sec22bO08547 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sec22bO08547 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sec22bO08547 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Sec22bO08547 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sec22bO08547 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sec22bO08547 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sec22bO08547 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.63■□□□□ 0.41
Sec22bO08547 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Sec22bO08547 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sec22bO08547 Gm7290-201ENSMUST00000104990 617 ntBASIC17.63■□□□□ 0.41
Sec22bO08547 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Sec22bO08547 Gm12918-201ENSMUST00000120234 636 ntBASIC17.63■□□□□ 0.41
Sec22bO08547 Gm15710-201ENSMUST00000121821 636 ntBASIC17.63■□□□□ 0.41
Sec22bO08547 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sec22bO08547 Gm5075-201ENSMUST00000196916 622 ntBASIC17.63■□□□□ 0.41
Sec22bO08547 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.63■□□□□ 0.41
Sec22bO08547 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.63■□□□□ 0.41
Sec22bO08547 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sec22bO08547 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.63■□□□□ 0.41
Sec22bO08547 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.63■□□□□ 0.41
Sec22bO08547 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sec22bO08547 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.63■□□□□ 0.41
Sec22bO08547 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.63■□□□□ 0.41
Sec22bO08547 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sec22bO08547 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sec22bO08547 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sec22bO08547 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms