Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shisa8J3QNX5 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Shisa8J3QNX5 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Shisa8J3QNX5 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.32■□□□□ 0.2
Shisa8J3QNX5 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Shisa8J3QNX5 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.32■□□□□ 0.2
Shisa8J3QNX5 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shisa8J3QNX5 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Shisa8J3QNX5 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shisa8J3QNX5 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shisa8J3QNX5 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shisa8J3QNX5 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shisa8J3QNX5 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Shisa8J3QNX5 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shisa8J3QNX5 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Shisa8J3QNX5 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.31■□□□□ 0.2
Shisa8J3QNX5 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shisa8J3QNX5 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Shisa8J3QNX5 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shisa8J3QNX5 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.31■□□□□ 0.2
Shisa8J3QNX5 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shisa8J3QNX5 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shisa8J3QNX5 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shisa8J3QNX5 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shisa8J3QNX5 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shisa8J3QNX5 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.31■□□□□ 0.2
Shisa8J3QNX5 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shisa8J3QNX5 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Shisa8J3QNX5 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Shisa8J3QNX5 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.31■□□□□ 0.2
Shisa8J3QNX5 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shisa8J3QNX5 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Shisa8J3QNX5 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Shisa8J3QNX5 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shisa8J3QNX5 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shisa8J3QNX5 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shisa8J3QNX5 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shisa8J3QNX5 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shisa8J3QNX5 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Shisa8J3QNX5 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Shisa8J3QNX5 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Shisa8J3QNX5 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Shisa8J3QNX5 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa8J3QNX5 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa8J3QNX5 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa8J3QNX5 Gm26833-201ENSMUST00000180899 440 ntBASIC16.3■□□□□ 0.2
Shisa8J3QNX5 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.3■□□□□ 0.2
Shisa8J3QNX5 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.3■□□□□ 0.2
Shisa8J3QNX5 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.3■□□□□ 0.2
Shisa8J3QNX5 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Shisa8J3QNX5 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa8J3QNX5 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa8J3QNX5 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa8J3QNX5 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa8J3QNX5 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shisa8J3QNX5 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shisa8J3QNX5 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shisa8J3QNX5 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Shisa8J3QNX5 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Shisa8J3QNX5 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.29■□□□□ 0.2
Shisa8J3QNX5 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Shisa8J3QNX5 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Shisa8J3QNX5 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.29■□□□□ 0.2
Shisa8J3QNX5 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shisa8J3QNX5 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shisa8J3QNX5 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC16.29■□□□□ 0.2
Shisa8J3QNX5 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.29■□□□□ 0.2
Shisa8J3QNX5 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Shisa8J3QNX5 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shisa8J3QNX5 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shisa8J3QNX5 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.29■□□□□ 0.2
Shisa8J3QNX5 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shisa8J3QNX5 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Shisa8J3QNX5 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shisa8J3QNX5 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Shisa8J3QNX5 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Shisa8J3QNX5 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shisa8J3QNX5 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.28■□□□□ 0.2
Shisa8J3QNX5 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shisa8J3QNX5 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Shisa8J3QNX5 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.28■□□□□ 0.2
Shisa8J3QNX5 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.28■□□□□ 0.2
Shisa8J3QNX5 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shisa8J3QNX5 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.28■□□□□ 0.2
Shisa8J3QNX5 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shisa8J3QNX5 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.28■□□□□ 0.2
Shisa8J3QNX5 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Shisa8J3QNX5 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.28■□□□□ 0.2
Shisa8J3QNX5 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shisa8J3QNX5 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shisa8J3QNX5 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shisa8J3QNX5 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Shisa8J3QNX5 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shisa8J3QNX5 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.27■□□□□ 0.2
Shisa8J3QNX5 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Shisa8J3QNX5 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shisa8J3QNX5 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shisa8J3QNX5 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Shisa8J3QNX5 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shisa8J3QNX5 Gm13241-201ENSMUST00000094493 780 ntBASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms