Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atf6F6VAN0 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atf6F6VAN0 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atf6F6VAN0 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atf6F6VAN0 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atf6F6VAN0 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atf6F6VAN0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
Atf6F6VAN0 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atf6F6VAN0 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Atf6F6VAN0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atf6F6VAN0 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Atf6F6VAN0 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Atf6F6VAN0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Atf6F6VAN0 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atf6F6VAN0 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atf6F6VAN0 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.36■□□□□ 0.53
Atf6F6VAN0 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Atf6F6VAN0 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.36■□□□□ 0.53
Atf6F6VAN0 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Atf6F6VAN0 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Atf6F6VAN0 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Atf6F6VAN0 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.35■□□□□ 0.53
Atf6F6VAN0 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Atf6F6VAN0 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Atf6F6VAN0 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atf6F6VAN0 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.35■□□□□ 0.53
Atf6F6VAN0 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atf6F6VAN0 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atf6F6VAN0 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atf6F6VAN0 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atf6F6VAN0 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atf6F6VAN0 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.34■□□□□ 0.53
Atf6F6VAN0 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atf6F6VAN0 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atf6F6VAN0 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.34■□□□□ 0.53
Atf6F6VAN0 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Atf6F6VAN0 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.34■□□□□ 0.53
Atf6F6VAN0 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.34■□□□□ 0.53
Atf6F6VAN0 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.34■□□□□ 0.53
Atf6F6VAN0 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Atf6F6VAN0 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atf6F6VAN0 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atf6F6VAN0 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atf6F6VAN0 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Atf6F6VAN0 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atf6F6VAN0 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atf6F6VAN0 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Atf6F6VAN0 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Atf6F6VAN0 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Atf6F6VAN0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Atf6F6VAN0 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Atf6F6VAN0 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Atf6F6VAN0 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Atf6F6VAN0 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Atf6F6VAN0 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atf6F6VAN0 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Atf6F6VAN0 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.33■□□□□ 0.52
Atf6F6VAN0 Gm10602-201ENSMUST00000098239 609 ntBASIC18.33■□□□□ 0.52
Atf6F6VAN0 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atf6F6VAN0 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atf6F6VAN0 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atf6F6VAN0 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atf6F6VAN0 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Atf6F6VAN0 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Atf6F6VAN0 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Atf6F6VAN0 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Atf6F6VAN0 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atf6F6VAN0 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atf6F6VAN0 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atf6F6VAN0 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Atf6F6VAN0 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.32■□□□□ 0.52
Atf6F6VAN0 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atf6F6VAN0 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atf6F6VAN0 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.32■□□□□ 0.52
Atf6F6VAN0 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Atf6F6VAN0 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Atf6F6VAN0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Atf6F6VAN0 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atf6F6VAN0 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Atf6F6VAN0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Atf6F6VAN0 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atf6F6VAN0 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atf6F6VAN0 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Atf6F6VAN0 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Atf6F6VAN0 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atf6F6VAN0 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atf6F6VAN0 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.31■□□□□ 0.52
Atf6F6VAN0 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.31■□□□□ 0.52
Atf6F6VAN0 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atf6F6VAN0 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.31■□□□□ 0.52
Atf6F6VAN0 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Atf6F6VAN0 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Atf6F6VAN0 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Atf6F6VAN0 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Atf6F6VAN0 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atf6F6VAN0 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atf6F6VAN0 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atf6F6VAN0 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.31■□□□□ 0.52
Atf6F6VAN0 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Atf6F6VAN0 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms