Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhb9E9Q5G2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhb9E9Q5G2 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhb9E9Q5G2 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhb9E9Q5G2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
Pcdhb9E9Q5G2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhb9E9Q5G2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhb9E9Q5G2 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhb9E9Q5G2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhb9E9Q5G2 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhb9E9Q5G2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhb9E9Q5G2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhb9E9Q5G2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhb9E9Q5G2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhb9E9Q5G2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhb9E9Q5G2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhb9E9Q5G2 Gm715-201ENSMUST00000117865 831 ntBASIC21.06■□□□□ 0.96
Pcdhb9E9Q5G2 Gm12382-201ENSMUST00000122005 922 ntBASIC21.06■□□□□ 0.96
Pcdhb9E9Q5G2 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhb9E9Q5G2 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC21.06■□□□□ 0.96
Pcdhb9E9Q5G2 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhb9E9Q5G2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhb9E9Q5G2 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhb9E9Q5G2 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC21.06■□□□□ 0.96
Pcdhb9E9Q5G2 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Pcdhb9E9Q5G2 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhb9E9Q5G2 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhb9E9Q5G2 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb9E9Q5G2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC21.05■□□□□ 0.96
Pcdhb9E9Q5G2 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb9E9Q5G2 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb9E9Q5G2 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb9E9Q5G2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Pcdhb9E9Q5G2 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC21.05■□□□□ 0.96
Pcdhb9E9Q5G2 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb9E9Q5G2 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC21.05■□□□□ 0.96
Pcdhb9E9Q5G2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb9E9Q5G2 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb9E9Q5G2 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb9E9Q5G2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb9E9Q5G2 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb9E9Q5G2 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb9E9Q5G2 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb9E9Q5G2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb9E9Q5G2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb9E9Q5G2 Fam105a-203ENSMUST00000226170 3043 ntBASIC21.04■□□□□ 0.96
Pcdhb9E9Q5G2 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb9E9Q5G2 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb9E9Q5G2 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC21.04■□□□□ 0.96
Pcdhb9E9Q5G2 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Pcdhb9E9Q5G2 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb9E9Q5G2 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb9E9Q5G2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC21.04■□□□□ 0.96
Pcdhb9E9Q5G2 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb9E9Q5G2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb9E9Q5G2 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb9E9Q5G2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC21.03■□□□□ 0.96
Pcdhb9E9Q5G2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC21.03■□□□□ 0.96
Pcdhb9E9Q5G2 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb9E9Q5G2 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC21.03■□□□□ 0.96
Pcdhb9E9Q5G2 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC21.03■□□□□ 0.96
Pcdhb9E9Q5G2 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC21.03■□□□□ 0.96
Pcdhb9E9Q5G2 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb9E9Q5G2 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb9E9Q5G2 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb9E9Q5G2 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC21.03■□□□□ 0.96
Pcdhb9E9Q5G2 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb9E9Q5G2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb9E9Q5G2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb9E9Q5G2 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb9E9Q5G2 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb9E9Q5G2 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb9E9Q5G2 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Pcdhb9E9Q5G2 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Pcdhb9E9Q5G2 Idnk-204ENSMUST00000226010 1898 ntBASIC21.02■□□□□ 0.96
Pcdhb9E9Q5G2 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb9E9Q5G2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Pcdhb9E9Q5G2 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb9E9Q5G2 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb9E9Q5G2 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Pcdhb9E9Q5G2 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Pcdhb9E9Q5G2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb9E9Q5G2 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC21.01■□□□□ 0.95
Pcdhb9E9Q5G2 AL672049.1-201ENSMUST00000197943 91 ntBASIC21.01■□□□□ 0.95
Pcdhb9E9Q5G2 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC21.01■□□□□ 0.95
Pcdhb9E9Q5G2 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb9E9Q5G2 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb9E9Q5G2 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb9E9Q5G2 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb9E9Q5G2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
Pcdhb9E9Q5G2 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb9E9Q5G2 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb9E9Q5G2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb9E9Q5G2 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb9E9Q5G2 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb9E9Q5G2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC21■□□□□ 0.95
Pcdhb9E9Q5G2 Gm10418-201ENSMUST00000100943 576 ntBASIC21■□□□□ 0.95
Pcdhb9E9Q5G2 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb9E9Q5G2 Gm13401-201ENSMUST00000117074 291 ntBASIC21■□□□□ 0.95
Pcdhb9E9Q5G2 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms