Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Rnf213E9Q555 AC124569.2-201ENSMUST00000225998 818 ntBASIC8.71□□□□□ -1.02
Rnf213E9Q555 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Rnf213E9Q555 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Rnf213E9Q555 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Rnf213E9Q555 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Rnf213E9Q555 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Rnf213E9Q555 Dmtn-209ENSMUST00000228295 2572 ntBASIC8.71□□□□□ -1.02
Rnf213E9Q555 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Rnf213E9Q555 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC8.71□□□□□ -1.02
Rnf213E9Q555 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Rnf213E9Q555 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Rnf213E9Q555 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Rnf213E9Q555 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Rnf213E9Q555 AC108858.1-201ENSMUST00000228461 1498 ntBASIC8.71□□□□□ -1.02
Rnf213E9Q555 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Rnf213E9Q555 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Rnf213E9Q555 Gm10052-201ENSMUST00000168019 960 ntBASIC8.7□□□□□ -1.02
Rnf213E9Q555 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC8.7□□□□□ -1.02
Rnf213E9Q555 AC159301.1-201ENSMUST00000225130 1182 ntBASIC8.7□□□□□ -1.02
Rnf213E9Q555 Gm7729-201ENSMUST00000050143 801 ntBASIC8.7□□□□□ -1.02
Rnf213E9Q555 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Rnf213E9Q555 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Rnf213E9Q555 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Rnf213E9Q555 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Rnf213E9Q555 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Rnf213E9Q555 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC8.7□□□□□ -1.02
Rnf213E9Q555 Gm10060-201ENSMUST00000212002 111 ntBASIC8.7□□□□□ -1.02
Rnf213E9Q555 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Rnf213E9Q555 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Rnf213E9Q555 Gm38345-201ENSMUST00000192635 1748 ntBASIC8.7□□□□□ -1.02
Rnf213E9Q555 Zkscan4-202ENSMUST00000225845 1506 ntBASIC8.7□□□□□ -1.02
Rnf213E9Q555 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC8.7□□□□□ -1.02
Rnf213E9Q555 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC8.7□□□□□ -1.02
Rnf213E9Q555 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC8.7□□□□□ -1.02
Rnf213E9Q555 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Rnf213E9Q555 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Rnf213E9Q555 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Rnf213E9Q555 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC8.7□□□□□ -1.02
Rnf213E9Q555 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Rnf213E9Q555 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC8.69□□□□□ -1.02
Rnf213E9Q555 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC8.69□□□□□ -1.02
Rnf213E9Q555 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Rnf213E9Q555 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC8.69□□□□□ -1.02
Rnf213E9Q555 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Rnf213E9Q555 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Rnf213E9Q555 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Rnf213E9Q555 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Rnf213E9Q555 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC8.69□□□□□ -1.02
Rnf213E9Q555 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC8.69□□□□□ -1.02
Rnf213E9Q555 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Rnf213E9Q555 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Rnf213E9Q555 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Rnf213E9Q555 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Rnf213E9Q555 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Rnf213E9Q555 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Rnf213E9Q555 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC8.69□□□□□ -1.02
Rnf213E9Q555 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Rnf213E9Q555 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Rnf213E9Q555 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Rnf213E9Q555 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Rnf213E9Q555 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC8.69□□□□□ -1.02
Rnf213E9Q555 Gm11452-201ENSMUST00000122376 690 ntBASIC8.69□□□□□ -1.02
Rnf213E9Q555 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Rnf213E9Q555 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Rnf213E9Q555 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC8.69□□□□□ -1.02
Rnf213E9Q555 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Rnf213E9Q555 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Rnf213E9Q555 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Rnf213E9Q555 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC8.68□□□□□ -1.02
Rnf213E9Q555 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC8.68□□□□□ -1.02
Rnf213E9Q555 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rnf213E9Q555 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rnf213E9Q555 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rnf213E9Q555 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
Rnf213E9Q555 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rnf213E9Q555 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC8.68□□□□□ -1.02
Rnf213E9Q555 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC8.68□□□□□ -1.02
Rnf213E9Q555 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rnf213E9Q555 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC8.68□□□□□ -1.02
Rnf213E9Q555 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rnf213E9Q555 AC131586.3-201ENSMUST00000228355 1367 ntBASIC8.68□□□□□ -1.02
Rnf213E9Q555 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rnf213E9Q555 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Rnf213E9Q555 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Rnf213E9Q555 Gm1401-201ENSMUST00000122048 772 ntBASIC8.68□□□□□ -1.02
Rnf213E9Q555 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rnf213E9Q555 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rnf213E9Q555 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Rnf213E9Q555 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Rnf213E9Q555 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rnf213E9Q555 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC8.68□□□□□ -1.02
Rnf213E9Q555 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rnf213E9Q555 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rnf213E9Q555 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Rnf213E9Q555 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rnf213E9Q555 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rnf213E9Q555 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rnf213E9Q555 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC8.67□□□□□ -1.02
Rnf213E9Q555 Gm12895-201ENSMUST00000122214 226 ntBASIC8.67□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms