Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Syce3B5KM66 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Syce3B5KM66 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Syce3B5KM66 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Syce3B5KM66 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Syce3B5KM66 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Syce3B5KM66 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.5■□□□□ 0.87
Syce3B5KM66 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Syce3B5KM66 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Syce3B5KM66 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Syce3B5KM66 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Syce3B5KM66 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Syce3B5KM66 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Syce3B5KM66 Gm15743-202ENSMUST00000182690 1901 ntBASIC20.49■□□□□ 0.87
Syce3B5KM66 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.49■□□□□ 0.87
Syce3B5KM66 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Syce3B5KM66 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Syce3B5KM66 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Syce3B5KM66 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.49■□□□□ 0.87
Syce3B5KM66 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.49■□□□□ 0.87
Syce3B5KM66 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Syce3B5KM66 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Syce3B5KM66 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Syce3B5KM66 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC20.49■□□□□ 0.87
Syce3B5KM66 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC20.49■□□□□ 0.87
Syce3B5KM66 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Syce3B5KM66 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Syce3B5KM66 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Syce3B5KM66 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
Syce3B5KM66 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Syce3B5KM66 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Syce3B5KM66 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Syce3B5KM66 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Syce3B5KM66 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Syce3B5KM66 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Syce3B5KM66 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Syce3B5KM66 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Syce3B5KM66 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Syce3B5KM66 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Syce3B5KM66 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Syce3B5KM66 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Syce3B5KM66 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Syce3B5KM66 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Syce3B5KM66 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Syce3B5KM66 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Syce3B5KM66 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Syce3B5KM66 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Syce3B5KM66 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Syce3B5KM66 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Syce3B5KM66 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Syce3B5KM66 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Syce3B5KM66 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Syce3B5KM66 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Syce3B5KM66 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.47■□□□□ 0.87
Syce3B5KM66 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Syce3B5KM66 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.47■□□□□ 0.87
Syce3B5KM66 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC20.47■□□□□ 0.87
Syce3B5KM66 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Syce3B5KM66 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.47■□□□□ 0.87
Syce3B5KM66 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Syce3B5KM66 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Syce3B5KM66 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Syce3B5KM66 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Syce3B5KM66 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Syce3B5KM66 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Syce3B5KM66 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Syce3B5KM66 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Syce3B5KM66 Gm43173-201ENSMUST00000202246 593 ntBASIC20.46■□□□□ 0.87
Syce3B5KM66 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Syce3B5KM66 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Syce3B5KM66 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Syce3B5KM66 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Syce3B5KM66 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Syce3B5KM66 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Syce3B5KM66 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Syce3B5KM66 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Syce3B5KM66 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Syce3B5KM66 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Syce3B5KM66 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Syce3B5KM66 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Syce3B5KM66 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Syce3B5KM66 Gm45774-201ENSMUST00000211992 2665 ntBASIC20.45■□□□□ 0.86
Syce3B5KM66 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Syce3B5KM66 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC20.45■□□□□ 0.86
Syce3B5KM66 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
Syce3B5KM66 Mir7075-201ENSMUST00000184187 82 ntBASIC20.45■□□□□ 0.86
Syce3B5KM66 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Syce3B5KM66 Gm9847-201ENSMUST00000052528 599 ntBASIC20.45■□□□□ 0.86
Syce3B5KM66 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Syce3B5KM66 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Syce3B5KM66 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Syce3B5KM66 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Syce3B5KM66 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Syce3B5KM66 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Syce3B5KM66 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Syce3B5KM66 Idnk-204ENSMUST00000226010 1898 ntBASIC20.44■□□□□ 0.86
Syce3B5KM66 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Syce3B5KM66 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Syce3B5KM66 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Syce3B5KM66 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms