Protein–RNA interactions for Protein: B2RXC1

Trappc11, Trafficking protein particle complex subunit 11, mousemouse

Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc11B2RXC1 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.65■□□□□ 0.74
Trappc11B2RXC1 Gm15375-201ENSMUST00000119510 849 ntBASIC19.65■□□□□ 0.74
Trappc11B2RXC1 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.65■□□□□ 0.74
Trappc11B2RXC1 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.65■□□□□ 0.74
Trappc11B2RXC1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trappc11B2RXC1 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.64■□□□□ 0.74
Trappc11B2RXC1 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trappc11B2RXC1 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Trappc11B2RXC1 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trappc11B2RXC1 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trappc11B2RXC1 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Trappc11B2RXC1 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trappc11B2RXC1 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.64■□□□□ 0.73
Trappc11B2RXC1 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.64■□□□□ 0.73
Trappc11B2RXC1 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trappc11B2RXC1 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trappc11B2RXC1 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trappc11B2RXC1 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trappc11B2RXC1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trappc11B2RXC1 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Trappc11B2RXC1 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.63■□□□□ 0.73
Trappc11B2RXC1 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trappc11B2RXC1 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trappc11B2RXC1 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trappc11B2RXC1 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Trappc11B2RXC1 Gm10418-201ENSMUST00000100943 576 ntBASIC19.63■□□□□ 0.73
Trappc11B2RXC1 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trappc11B2RXC1 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.63■□□□□ 0.73
Trappc11B2RXC1 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.63■□□□□ 0.73
Trappc11B2RXC1 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trappc11B2RXC1 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.63■□□□□ 0.73
Trappc11B2RXC1 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trappc11B2RXC1 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trappc11B2RXC1 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.63■□□□□ 0.73
Trappc11B2RXC1 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trappc11B2RXC1 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Trappc11B2RXC1 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trappc11B2RXC1 Idnk-204ENSMUST00000226010 1898 ntBASIC19.62■□□□□ 0.73
Trappc11B2RXC1 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trappc11B2RXC1 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trappc11B2RXC1 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trappc11B2RXC1 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.62■□□□□ 0.73
Trappc11B2RXC1 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trappc11B2RXC1 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trappc11B2RXC1 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trappc11B2RXC1 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.62■□□□□ 0.73
Trappc11B2RXC1 Gm18666-201ENSMUST00000190039 958 ntBASIC19.62■□□□□ 0.73
Trappc11B2RXC1 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trappc11B2RXC1 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.62■□□□□ 0.73
Trappc11B2RXC1 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trappc11B2RXC1 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trappc11B2RXC1 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trappc11B2RXC1 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trappc11B2RXC1 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trappc11B2RXC1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trappc11B2RXC1 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trappc11B2RXC1 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trappc11B2RXC1 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trappc11B2RXC1 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trappc11B2RXC1 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trappc11B2RXC1 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trappc11B2RXC1 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trappc11B2RXC1 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Trappc11B2RXC1 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trappc11B2RXC1 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.61■□□□□ 0.73
Trappc11B2RXC1 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trappc11B2RXC1 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
Trappc11B2RXC1 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trappc11B2RXC1 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trappc11B2RXC1 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trappc11B2RXC1 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trappc11B2RXC1 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trappc11B2RXC1 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.6■□□□□ 0.73
Trappc11B2RXC1 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trappc11B2RXC1 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trappc11B2RXC1 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.6■□□□□ 0.73
Trappc11B2RXC1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trappc11B2RXC1 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trappc11B2RXC1 Gm10653-202ENSMUST00000139570 835 ntBASIC19.6■□□□□ 0.73
Trappc11B2RXC1 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trappc11B2RXC1 Gm20760-201ENSMUST00000179197 648 ntBASIC19.6■□□□□ 0.73
Trappc11B2RXC1 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.6■□□□□ 0.73
Trappc11B2RXC1 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
Trappc11B2RXC1 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Trappc11B2RXC1 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.6■□□□□ 0.73
Trappc11B2RXC1 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.6■□□□□ 0.73
Trappc11B2RXC1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Trappc11B2RXC1 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Trappc11B2RXC1 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Trappc11B2RXC1 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.59■□□□□ 0.73
Trappc11B2RXC1 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Trappc11B2RXC1 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.59■□□□□ 0.73
Trappc11B2RXC1 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trappc11B2RXC1 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trappc11B2RXC1 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Trappc11B2RXC1 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Trappc11B2RXC1 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trappc11B2RXC1 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trappc11B2RXC1 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trappc11B2RXC1 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms