Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
IsxA1A546 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IsxA1A546 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
IsxA1A546 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
IsxA1A546 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
IsxA1A546 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IsxA1A546 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IsxA1A546 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
IsxA1A546 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
IsxA1A546 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IsxA1A546 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
IsxA1A546 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IsxA1A546 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
IsxA1A546 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
IsxA1A546 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
IsxA1A546 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IsxA1A546 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
IsxA1A546 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
IsxA1A546 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
IsxA1A546 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IsxA1A546 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.61■□□□□ 0.25
IsxA1A546 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
IsxA1A546 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IsxA1A546 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
IsxA1A546 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IsxA1A546 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IsxA1A546 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
IsxA1A546 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IsxA1A546 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
IsxA1A546 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
IsxA1A546 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.6■□□□□ 0.25
IsxA1A546 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
IsxA1A546 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
IsxA1A546 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IsxA1A546 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IsxA1A546 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IsxA1A546 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.6■□□□□ 0.25
IsxA1A546 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
IsxA1A546 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
IsxA1A546 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IsxA1A546 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IsxA1A546 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IsxA1A546 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IsxA1A546 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
IsxA1A546 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
IsxA1A546 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IsxA1A546 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
IsxA1A546 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
IsxA1A546 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.59■□□□□ 0.25
IsxA1A546 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.59■□□□□ 0.25
IsxA1A546 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
IsxA1A546 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.59■□□□□ 0.25
IsxA1A546 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
IsxA1A546 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IsxA1A546 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IsxA1A546 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
IsxA1A546 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IsxA1A546 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.58■□□□□ 0.25
IsxA1A546 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
IsxA1A546 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
IsxA1A546 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
IsxA1A546 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.58■□□□□ 0.25
IsxA1A546 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
IsxA1A546 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
IsxA1A546 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
IsxA1A546 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
IsxA1A546 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC16.58■□□□□ 0.24
IsxA1A546 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
IsxA1A546 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
IsxA1A546 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IsxA1A546 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
IsxA1A546 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
IsxA1A546 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IsxA1A546 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IsxA1A546 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.58■□□□□ 0.24
IsxA1A546 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
IsxA1A546 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.58■□□□□ 0.24
IsxA1A546 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
IsxA1A546 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IsxA1A546 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
IsxA1A546 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IsxA1A546 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IsxA1A546 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
IsxA1A546 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IsxA1A546 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IsxA1A546 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.57■□□□□ 0.24
IsxA1A546 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IsxA1A546 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
IsxA1A546 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
IsxA1A546 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IsxA1A546 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.57■□□□□ 0.24
IsxA1A546 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
IsxA1A546 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.57■□□□□ 0.24
IsxA1A546 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.57■□□□□ 0.24
IsxA1A546 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.57■□□□□ 0.24
IsxA1A546 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
IsxA1A546 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IsxA1A546 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
IsxA1A546 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
IsxA1A546 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms