Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav12-1A0N8R1 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav12-1A0N8R1 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav12-1A0N8R1 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav12-1A0N8R1 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav12-1A0N8R1 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav12-1A0N8R1 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav12-1A0N8R1 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Trav12-1A0N8R1 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav12-1A0N8R1 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav12-1A0N8R1 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.93□□□□□ -0.02
Trav12-1A0N8R1 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav12-1A0N8R1 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav12-1A0N8R1 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav12-1A0N8R1 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav12-1A0N8R1 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC14.93□□□□□ -0.02
Trav12-1A0N8R1 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav12-1A0N8R1 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav12-1A0N8R1 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav12-1A0N8R1 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav12-1A0N8R1 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav12-1A0N8R1 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav12-1A0N8R1 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav12-1A0N8R1 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav12-1A0N8R1 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav12-1A0N8R1 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav12-1A0N8R1 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav12-1A0N8R1 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav12-1A0N8R1 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
Trav12-1A0N8R1 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav12-1A0N8R1 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav12-1A0N8R1 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav12-1A0N8R1 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav12-1A0N8R1 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav12-1A0N8R1 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav12-1A0N8R1 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav12-1A0N8R1 Nespas-201ENSMUST00000143738 1083 ntBASIC14.92□□□□□ -0.02
Trav12-1A0N8R1 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trav12-1A0N8R1 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav12-1A0N8R1 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav12-1A0N8R1 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav12-1A0N8R1 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav12-1A0N8R1 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav12-1A0N8R1 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav12-1A0N8R1 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav12-1A0N8R1 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Trav12-1A0N8R1 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav12-1A0N8R1 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Trav12-1A0N8R1 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.92□□□□□ -0.02
Trav12-1A0N8R1 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trav12-1A0N8R1 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav12-1A0N8R1 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav12-1A0N8R1 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav12-1A0N8R1 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav12-1A0N8R1 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Trav12-1A0N8R1 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trav12-1A0N8R1 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav12-1A0N8R1 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
Trav12-1A0N8R1 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav12-1A0N8R1 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav12-1A0N8R1 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav12-1A0N8R1 Gm10493-201ENSMUST00000097270 612 ntBASIC14.91□□□□□ -0.02
Trav12-1A0N8R1 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav12-1A0N8R1 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Trav12-1A0N8R1 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Trav12-1A0N8R1 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trav12-1A0N8R1 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.91□□□□□ -0.02
Trav12-1A0N8R1 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav12-1A0N8R1 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav12-1A0N8R1 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav12-1A0N8R1 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12-1A0N8R1 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12-1A0N8R1 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12-1A0N8R1 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trav12-1A0N8R1 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trav12-1A0N8R1 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12-1A0N8R1 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12-1A0N8R1 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12-1A0N8R1 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trav12-1A0N8R1 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12-1A0N8R1 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12-1A0N8R1 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12-1A0N8R1 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12-1A0N8R1 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.9□□□□□ -0.02
Trav12-1A0N8R1 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.9□□□□□ -0.02
Trav12-1A0N8R1 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12-1A0N8R1 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12-1A0N8R1 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12-1A0N8R1 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12-1A0N8R1 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.9□□□□□ -0.02
Trav12-1A0N8R1 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12-1A0N8R1 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12-1A0N8R1 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12-1A0N8R1 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12-1A0N8R1 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12-1A0N8R1 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12-1A0N8R1 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav12-1A0N8R1 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav12-1A0N8R1 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav12-1A0N8R1 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms