Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smim17A0A504 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smim17A0A504 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smim17A0A504 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smim17A0A504 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Smim17A0A504 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.24■□□□□ 0.19
Smim17A0A504 Gm18755-201ENSMUST00000218030 1099 ntBASIC16.24■□□□□ 0.19
Smim17A0A504 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smim17A0A504 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smim17A0A504 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smim17A0A504 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smim17A0A504 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smim17A0A504 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smim17A0A504 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smim17A0A504 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smim17A0A504 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smim17A0A504 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Smim17A0A504 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smim17A0A504 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Smim17A0A504 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smim17A0A504 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.23■□□□□ 0.19
Smim17A0A504 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smim17A0A504 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.23■□□□□ 0.19
Smim17A0A504 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smim17A0A504 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smim17A0A504 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smim17A0A504 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smim17A0A504 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Smim17A0A504 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smim17A0A504 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.23■□□□□ 0.19
Smim17A0A504 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smim17A0A504 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smim17A0A504 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smim17A0A504 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Smim17A0A504 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smim17A0A504 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smim17A0A504 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smim17A0A504 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smim17A0A504 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smim17A0A504 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smim17A0A504 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.22■□□□□ 0.19
Smim17A0A504 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smim17A0A504 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smim17A0A504 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smim17A0A504 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smim17A0A504 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.22■□□□□ 0.19
Smim17A0A504 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.22■□□□□ 0.19
Smim17A0A504 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smim17A0A504 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smim17A0A504 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smim17A0A504 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smim17A0A504 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Smim17A0A504 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smim17A0A504 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smim17A0A504 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.22■□□□□ 0.19
Smim17A0A504 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smim17A0A504 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smim17A0A504 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smim17A0A504 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smim17A0A504 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smim17A0A504 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smim17A0A504 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smim17A0A504 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smim17A0A504 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.21■□□□□ 0.19
Smim17A0A504 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smim17A0A504 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Smim17A0A504 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smim17A0A504 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smim17A0A504 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smim17A0A504 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Smim17A0A504 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smim17A0A504 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.21■□□□□ 0.19
Smim17A0A504 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC16.21■□□□□ 0.19
Smim17A0A504 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smim17A0A504 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smim17A0A504 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smim17A0A504 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.21■□□□□ 0.19
Smim17A0A504 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smim17A0A504 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Smim17A0A504 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Smim17A0A504 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Smim17A0A504 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smim17A0A504 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smim17A0A504 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smim17A0A504 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smim17A0A504 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Smim17A0A504 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smim17A0A504 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smim17A0A504 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Smim17A0A504 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smim17A0A504 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smim17A0A504 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smim17A0A504 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smim17A0A504 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smim17A0A504 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Smim17A0A504 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Smim17A0A504 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smim17A0A504 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smim17A0A504 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Smim17A0A504 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms