Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv13-2A0A140T8N6 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Trbv13-2A0A140T8N6 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv13-2A0A140T8N6 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv13-2A0A140T8N6 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv13-2A0A140T8N6 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv13-2A0A140T8N6 Tgds-204ENSMUST00000228543 1594 ntBASIC12.47□□□□□ -0.41
Trbv13-2A0A140T8N6 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv13-2A0A140T8N6 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv13-2A0A140T8N6 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv13-2A0A140T8N6 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv13-2A0A140T8N6 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv13-2A0A140T8N6 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv13-2A0A140T8N6 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv13-2A0A140T8N6 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv13-2A0A140T8N6 Gm2399-201ENSMUST00000104944 225 ntBASIC12.46□□□□□ -0.41
Trbv13-2A0A140T8N6 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Trbv13-2A0A140T8N6 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trbv13-2A0A140T8N6 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv13-2A0A140T8N6 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC12.46□□□□□ -0.41
Trbv13-2A0A140T8N6 Gm44672-201ENSMUST00000206944 1098 ntBASIC12.46□□□□□ -0.41
Trbv13-2A0A140T8N6 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv13-2A0A140T8N6 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv13-2A0A140T8N6 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv13-2A0A140T8N6 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv13-2A0A140T8N6 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trbv13-2A0A140T8N6 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC12.46□□□□□ -0.41
Trbv13-2A0A140T8N6 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv13-2A0A140T8N6 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv13-2A0A140T8N6 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv13-2A0A140T8N6 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv13-2A0A140T8N6 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC12.46□□□□□ -0.42
Trbv13-2A0A140T8N6 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv13-2A0A140T8N6 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv13-2A0A140T8N6 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Trbv13-2A0A140T8N6 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-2A0A140T8N6 Gm43859-201ENSMUST00000200075 1412 ntBASIC12.45□□□□□ -0.42
Trbv13-2A0A140T8N6 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-2A0A140T8N6 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-2A0A140T8N6 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-2A0A140T8N6 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-2A0A140T8N6 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trbv13-2A0A140T8N6 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-2A0A140T8N6 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-2A0A140T8N6 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-2A0A140T8N6 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Trbv13-2A0A140T8N6 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-2A0A140T8N6 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-2A0A140T8N6 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC12.45□□□□□ -0.42
Trbv13-2A0A140T8N6 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC12.45□□□□□ -0.42
Trbv13-2A0A140T8N6 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-2A0A140T8N6 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-2A0A140T8N6 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-2A0A140T8N6 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trbv13-2A0A140T8N6 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-2A0A140T8N6 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trbv13-2A0A140T8N6 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-2A0A140T8N6 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-2A0A140T8N6 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-2A0A140T8N6 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-2A0A140T8N6 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-2A0A140T8N6 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-2A0A140T8N6 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-2A0A140T8N6 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-2A0A140T8N6 Grk6-206ENSMUST00000224995 2971 ntBASIC12.44□□□□□ -0.42
Trbv13-2A0A140T8N6 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-2A0A140T8N6 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-2A0A140T8N6 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-2A0A140T8N6 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-2A0A140T8N6 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-2A0A140T8N6 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC12.44□□□□□ -0.42
Trbv13-2A0A140T8N6 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trbv13-2A0A140T8N6 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-2A0A140T8N6 AC122769.4-201ENSMUST00000228166 901 ntBASIC12.44□□□□□ -0.42
Trbv13-2A0A140T8N6 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trbv13-2A0A140T8N6 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trbv13-2A0A140T8N6 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-2A0A140T8N6 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-2A0A140T8N6 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-2A0A140T8N6 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-2A0A140T8N6 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC12.44□□□□□ -0.42
Trbv13-2A0A140T8N6 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC12.44□□□□□ -0.42
Trbv13-2A0A140T8N6 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-2A0A140T8N6 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv13-2A0A140T8N6 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC12.43□□□□□ -0.42
Trbv13-2A0A140T8N6 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC12.43□□□□□ -0.42
Trbv13-2A0A140T8N6 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv13-2A0A140T8N6 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv13-2A0A140T8N6 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv13-2A0A140T8N6 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC12.43□□□□□ -0.42
Trbv13-2A0A140T8N6 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv13-2A0A140T8N6 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trbv13-2A0A140T8N6 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC12.43□□□□□ -0.42
Trbv13-2A0A140T8N6 Gm9954-202ENSMUST00000198686 4725 ntBASIC12.43□□□□□ -0.42
Trbv13-2A0A140T8N6 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv13-2A0A140T8N6 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv13-2A0A140T8N6 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv13-2A0A140T8N6 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trbv13-2A0A140T8N6 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv13-2A0A140T8N6 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms