Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igkv1-88A0A140T8N1 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igkv1-88A0A140T8N1 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igkv1-88A0A140T8N1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Igkv1-88A0A140T8N1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC11.84□□□□□ -0.51
Igkv1-88A0A140T8N1 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Igkv1-88A0A140T8N1 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igkv1-88A0A140T8N1 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Igkv1-88A0A140T8N1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igkv1-88A0A140T8N1 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igkv1-88A0A140T8N1 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igkv1-88A0A140T8N1 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igkv1-88A0A140T8N1 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igkv1-88A0A140T8N1 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Igkv1-88A0A140T8N1 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Igkv1-88A0A140T8N1 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Igkv1-88A0A140T8N1 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igkv1-88A0A140T8N1 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Igkv1-88A0A140T8N1 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Igkv1-88A0A140T8N1 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Igkv1-88A0A140T8N1 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Igkv1-88A0A140T8N1 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Igkv1-88A0A140T8N1 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igkv1-88A0A140T8N1 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igkv1-88A0A140T8N1 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igkv1-88A0A140T8N1 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igkv1-88A0A140T8N1 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igkv1-88A0A140T8N1 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igkv1-88A0A140T8N1 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igkv1-88A0A140T8N1 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igkv1-88A0A140T8N1 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igkv1-88A0A140T8N1 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igkv1-88A0A140T8N1 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igkv1-88A0A140T8N1 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igkv1-88A0A140T8N1 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv1-88A0A140T8N1 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv1-88A0A140T8N1 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv1-88A0A140T8N1 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Igkv1-88A0A140T8N1 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv1-88A0A140T8N1 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv1-88A0A140T8N1 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv1-88A0A140T8N1 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv1-88A0A140T8N1 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC11.82□□□□□ -0.52
Igkv1-88A0A140T8N1 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv1-88A0A140T8N1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv1-88A0A140T8N1 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv1-88A0A140T8N1 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv1-88A0A140T8N1 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv1-88A0A140T8N1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv1-88A0A140T8N1 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv1-88A0A140T8N1 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv1-88A0A140T8N1 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC11.82□□□□□ -0.52
Igkv1-88A0A140T8N1 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv1-88A0A140T8N1 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv1-88A0A140T8N1 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv1-88A0A140T8N1 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv1-88A0A140T8N1 Gm21956-201ENSMUST00000179946 522 ntBASIC11.82□□□□□ -0.52
Igkv1-88A0A140T8N1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC11.82□□□□□ -0.52
Igkv1-88A0A140T8N1 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC11.82□□□□□ -0.52
Igkv1-88A0A140T8N1 Gm45906-201ENSMUST00000208911 1430 ntBASIC11.82□□□□□ -0.52
Igkv1-88A0A140T8N1 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Igkv1-88A0A140T8N1 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv1-88A0A140T8N1 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv1-88A0A140T8N1 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv1-88A0A140T8N1 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Igkv1-88A0A140T8N1 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv1-88A0A140T8N1 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv1-88A0A140T8N1 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv1-88A0A140T8N1 Gm43702-201ENSMUST00000198772 2546 ntBASIC11.81□□□□□ -0.52
Igkv1-88A0A140T8N1 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv1-88A0A140T8N1 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv1-88A0A140T8N1 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv1-88A0A140T8N1 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv1-88A0A140T8N1 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv1-88A0A140T8N1 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Igkv1-88A0A140T8N1 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv1-88A0A140T8N1 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv1-88A0A140T8N1 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC11.81□□□□□ -0.52
Igkv1-88A0A140T8N1 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv1-88A0A140T8N1 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv1-88A0A140T8N1 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv1-88A0A140T8N1 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Igkv1-88A0A140T8N1 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv1-88A0A140T8N1 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv1-88A0A140T8N1 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Igkv1-88A0A140T8N1 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv1-88A0A140T8N1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv1-88A0A140T8N1 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv1-88A0A140T8N1 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Igkv1-88A0A140T8N1 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv1-88A0A140T8N1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv1-88A0A140T8N1 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv1-88A0A140T8N1 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv1-88A0A140T8N1 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Igkv1-88A0A140T8N1 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv1-88A0A140T8N1 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv1-88A0A140T8N1 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Igkv1-88A0A140T8N1 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv1-88A0A140T8N1 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv1-88A0A140T8N1 Gm26833-201ENSMUST00000180899 440 ntBASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms