Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav23A0A0G2JG17 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav23A0A0G2JG17 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav23A0A0G2JG17 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav23A0A0G2JG17 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav23A0A0G2JG17 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trav23A0A0G2JG17 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav23A0A0G2JG17 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav23A0A0G2JG17 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.66□□□□□ -0.06
Trav23A0A0G2JG17 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav23A0A0G2JG17 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav23A0A0G2JG17 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav23A0A0G2JG17 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav23A0A0G2JG17 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav23A0A0G2JG17 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Trav23A0A0G2JG17 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav23A0A0G2JG17 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav23A0A0G2JG17 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav23A0A0G2JG17 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav23A0A0G2JG17 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav23A0A0G2JG17 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav23A0A0G2JG17 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav23A0A0G2JG17 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Trav23A0A0G2JG17 Gm12669-201ENSMUST00000122162 1009 ntBASIC14.65□□□□□ -0.06
Trav23A0A0G2JG17 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC14.65□□□□□ -0.06
Trav23A0A0G2JG17 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.65□□□□□ -0.06
Trav23A0A0G2JG17 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav23A0A0G2JG17 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav23A0A0G2JG17 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav23A0A0G2JG17 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav23A0A0G2JG17 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav23A0A0G2JG17 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav23A0A0G2JG17 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav23A0A0G2JG17 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav23A0A0G2JG17 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav23A0A0G2JG17 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav23A0A0G2JG17 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav23A0A0G2JG17 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav23A0A0G2JG17 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav23A0A0G2JG17 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav23A0A0G2JG17 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav23A0A0G2JG17 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav23A0A0G2JG17 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav23A0A0G2JG17 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav23A0A0G2JG17 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav23A0A0G2JG17 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav23A0A0G2JG17 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav23A0A0G2JG17 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav23A0A0G2JG17 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav23A0A0G2JG17 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trav23A0A0G2JG17 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC14.64□□□□□ -0.07
Trav23A0A0G2JG17 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav23A0A0G2JG17 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav23A0A0G2JG17 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav23A0A0G2JG17 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav23A0A0G2JG17 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav23A0A0G2JG17 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav23A0A0G2JG17 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav23A0A0G2JG17 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav23A0A0G2JG17 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav23A0A0G2JG17 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Trav23A0A0G2JG17 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav23A0A0G2JG17 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav23A0A0G2JG17 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trav23A0A0G2JG17 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav23A0A0G2JG17 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav23A0A0G2JG17 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav23A0A0G2JG17 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav23A0A0G2JG17 Gm27011-201ENSMUST00000182352 972 ntBASIC14.63□□□□□ -0.07
Trav23A0A0G2JG17 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav23A0A0G2JG17 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav23A0A0G2JG17 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav23A0A0G2JG17 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trav23A0A0G2JG17 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trav23A0A0G2JG17 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trav23A0A0G2JG17 Gm35558-201ENSMUST00000222675 2219 ntBASIC14.63□□□□□ -0.07
Trav23A0A0G2JG17 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC14.63□□□□□ -0.07
Trav23A0A0G2JG17 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav23A0A0G2JG17 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav23A0A0G2JG17 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav23A0A0G2JG17 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Trav23A0A0G2JG17 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav23A0A0G2JG17 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav23A0A0G2JG17 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav23A0A0G2JG17 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav23A0A0G2JG17 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.62□□□□□ -0.07
Trav23A0A0G2JG17 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav23A0A0G2JG17 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav23A0A0G2JG17 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav23A0A0G2JG17 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav23A0A0G2JG17 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav23A0A0G2JG17 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav23A0A0G2JG17 BC021767-201ENSMUST00000126387 1716 ntBASIC14.62□□□□□ -0.07
Trav23A0A0G2JG17 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav23A0A0G2JG17 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav23A0A0G2JG17 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav23A0A0G2JG17 AC112142.1-201ENSMUST00000228796 918 ntBASIC14.62□□□□□ -0.07
Trav23A0A0G2JG17 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav23A0A0G2JG17 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav23A0A0G2JG17 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms