Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav19A0A0B4J1K4 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav19A0A0B4J1K4 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC13.4□□□□□ -0.26
Trav19A0A0B4J1K4 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC13.4□□□□□ -0.26
Trav19A0A0B4J1K4 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC13.4□□□□□ -0.26
Trav19A0A0B4J1K4 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC13.4□□□□□ -0.26
Trav19A0A0B4J1K4 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav19A0A0B4J1K4 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav19A0A0B4J1K4 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Trav19A0A0B4J1K4 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav19A0A0B4J1K4 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav19A0A0B4J1K4 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav19A0A0B4J1K4 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav19A0A0B4J1K4 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav19A0A0B4J1K4 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.27
Trav19A0A0B4J1K4 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav19A0A0B4J1K4 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Trav19A0A0B4J1K4 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav19A0A0B4J1K4 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trav19A0A0B4J1K4 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav19A0A0B4J1K4 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav19A0A0B4J1K4 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC13.39□□□□□ -0.27
Trav19A0A0B4J1K4 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav19A0A0B4J1K4 Gm12821-201ENSMUST00000120022 600 ntBASIC13.39□□□□□ -0.27
Trav19A0A0B4J1K4 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC13.39□□□□□ -0.27
Trav19A0A0B4J1K4 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav19A0A0B4J1K4 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Trav19A0A0B4J1K4 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav19A0A0B4J1K4 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav19A0A0B4J1K4 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trav19A0A0B4J1K4 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav19A0A0B4J1K4 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav19A0A0B4J1K4 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav19A0A0B4J1K4 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav19A0A0B4J1K4 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav19A0A0B4J1K4 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav19A0A0B4J1K4 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav19A0A0B4J1K4 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav19A0A0B4J1K4 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav19A0A0B4J1K4 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Trav19A0A0B4J1K4 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav19A0A0B4J1K4 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trav19A0A0B4J1K4 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav19A0A0B4J1K4 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav19A0A0B4J1K4 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav19A0A0B4J1K4 AC121598.2-201ENSMUST00000228376 2325 ntBASIC13.38□□□□□ -0.27
Trav19A0A0B4J1K4 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav19A0A0B4J1K4 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav19A0A0B4J1K4 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav19A0A0B4J1K4 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC13.38□□□□□ -0.27
Trav19A0A0B4J1K4 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
Trav19A0A0B4J1K4 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav19A0A0B4J1K4 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav19A0A0B4J1K4 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC13.38□□□□□ -0.27
Trav19A0A0B4J1K4 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav19A0A0B4J1K4 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav19A0A0B4J1K4 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav19A0A0B4J1K4 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav19A0A0B4J1K4 Gm6598-201ENSMUST00000202719 2615 ntBASIC13.38□□□□□ -0.27
Trav19A0A0B4J1K4 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav19A0A0B4J1K4 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav19A0A0B4J1K4 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav19A0A0B4J1K4 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav19A0A0B4J1K4 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav19A0A0B4J1K4 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav19A0A0B4J1K4 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav19A0A0B4J1K4 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav19A0A0B4J1K4 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav19A0A0B4J1K4 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav19A0A0B4J1K4 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav19A0A0B4J1K4 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav19A0A0B4J1K4 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Trav19A0A0B4J1K4 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav19A0A0B4J1K4 Gm21956-201ENSMUST00000179946 522 ntBASIC13.37□□□□□ -0.27
Trav19A0A0B4J1K4 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav19A0A0B4J1K4 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav19A0A0B4J1K4 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav19A0A0B4J1K4 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav19A0A0B4J1K4 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav19A0A0B4J1K4 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav19A0A0B4J1K4 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav19A0A0B4J1K4 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav19A0A0B4J1K4 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav19A0A0B4J1K4 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav19A0A0B4J1K4 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav19A0A0B4J1K4 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav19A0A0B4J1K4 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav19A0A0B4J1K4 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav19A0A0B4J1K4 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav19A0A0B4J1K4 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav19A0A0B4J1K4 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav19A0A0B4J1K4 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC13.36□□□□□ -0.27
Trav19A0A0B4J1K4 AC160393.1-201ENSMUST00000218378 1279 ntBASIC13.36□□□□□ -0.27
Trav19A0A0B4J1K4 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Trav19A0A0B4J1K4 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav19A0A0B4J1K4 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav19A0A0B4J1K4 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav19A0A0B4J1K4 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav19A0A0B4J1K4 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav19A0A0B4J1K4 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms