Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv20A0A0B4J1H5 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv20A0A0B4J1H5 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trbv20A0A0B4J1H5 Haglr-201ENSMUST00000100000 2085 ntBASIC16.04■□□□□ 0.16
Trbv20A0A0B4J1H5 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.04■□□□□ 0.16
Trbv20A0A0B4J1H5 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trbv20A0A0B4J1H5 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv20A0A0B4J1H5 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trbv20A0A0B4J1H5 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv20A0A0B4J1H5 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv20A0A0B4J1H5 Smad6-203ENSMUST00000179458 273 ntBASIC16.04■□□□□ 0.16
Trbv20A0A0B4J1H5 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.04■□□□□ 0.16
Trbv20A0A0B4J1H5 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.04■□□□□ 0.16
Trbv20A0A0B4J1H5 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv20A0A0B4J1H5 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv20A0A0B4J1H5 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
Trbv20A0A0B4J1H5 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trbv20A0A0B4J1H5 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.04■□□□□ 0.16
Trbv20A0A0B4J1H5 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv20A0A0B4J1H5 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Trbv20A0A0B4J1H5 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv20A0A0B4J1H5 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv20A0A0B4J1H5 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv20A0A0B4J1H5 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv20A0A0B4J1H5 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv20A0A0B4J1H5 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv20A0A0B4J1H5 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv20A0A0B4J1H5 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Trbv20A0A0B4J1H5 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv20A0A0B4J1H5 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv20A0A0B4J1H5 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv20A0A0B4J1H5 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv20A0A0B4J1H5 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv20A0A0B4J1H5 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv20A0A0B4J1H5 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv20A0A0B4J1H5 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.02■□□□□ 0.16
Trbv20A0A0B4J1H5 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv20A0A0B4J1H5 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv20A0A0B4J1H5 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Trbv20A0A0B4J1H5 Gm43137-201ENSMUST00000198052 594 ntBASIC16.02■□□□□ 0.16
Trbv20A0A0B4J1H5 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv20A0A0B4J1H5 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv20A0A0B4J1H5 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv20A0A0B4J1H5 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Trbv20A0A0B4J1H5 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
Trbv20A0A0B4J1H5 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trbv20A0A0B4J1H5 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trbv20A0A0B4J1H5 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.02■□□□□ 0.15
Trbv20A0A0B4J1H5 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trbv20A0A0B4J1H5 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trbv20A0A0B4J1H5 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.02■□□□□ 0.15
Trbv20A0A0B4J1H5 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Trbv20A0A0B4J1H5 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv20A0A0B4J1H5 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv20A0A0B4J1H5 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Trbv20A0A0B4J1H5 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv20A0A0B4J1H5 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv20A0A0B4J1H5 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv20A0A0B4J1H5 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.01■□□□□ 0.15
Trbv20A0A0B4J1H5 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv20A0A0B4J1H5 Gm38205-201ENSMUST00000192243 258 ntBASIC16.01■□□□□ 0.15
Trbv20A0A0B4J1H5 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv20A0A0B4J1H5 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.01■□□□□ 0.15
Trbv20A0A0B4J1H5 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv20A0A0B4J1H5 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv20A0A0B4J1H5 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Trbv20A0A0B4J1H5 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv20A0A0B4J1H5 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv20A0A0B4J1H5 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trbv20A0A0B4J1H5 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trbv20A0A0B4J1H5 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv20A0A0B4J1H5 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv20A0A0B4J1H5 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv20A0A0B4J1H5 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv20A0A0B4J1H5 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv20A0A0B4J1H5 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv20A0A0B4J1H5 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv20A0A0B4J1H5 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trbv20A0A0B4J1H5 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
Trbv20A0A0B4J1H5 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trbv20A0A0B4J1H5 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Trbv20A0A0B4J1H5 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv20A0A0B4J1H5 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv20A0A0B4J1H5 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv20A0A0B4J1H5 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trbv20A0A0B4J1H5 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv20A0A0B4J1H5 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv20A0A0B4J1H5 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv20A0A0B4J1H5 Idnk-204ENSMUST00000226010 1898 ntBASIC15.99■□□□□ 0.15
Trbv20A0A0B4J1H5 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv20A0A0B4J1H5 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv20A0A0B4J1H5 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv20A0A0B4J1H5 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.99■□□□□ 0.15
Trbv20A0A0B4J1H5 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.99■□□□□ 0.15
Trbv20A0A0B4J1H5 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv20A0A0B4J1H5 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv20A0A0B4J1H5 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv20A0A0B4J1H5 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Trbv20A0A0B4J1H5 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trbv20A0A0B4J1H5 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms