Protein–RNA interactions for Protein: A0A0A6YWL2

Ighv3-3, Immunoglobulin heavy variable V3-3 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-3A0A0A6YWL2 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC13.12□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Idnk-204ENSMUST00000226010 1898 ntBASIC13.12□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC13.11□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Ap3s1-204ENSMUST00000225520 957 ntBASIC13.11□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC13.1□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC13.09□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Gm37563-201ENSMUST00000192580 1513 ntBASIC13.09□□□□□ -0.31
Ighv3-3A0A0A6YWL2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv3-3A0A0A6YWL2 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC13.09□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv3-3A0A0A6YWL2 AC164629.5-201ENSMUST00000220387 632 ntBASIC13.09□□□□□ -0.31
Ighv3-3A0A0A6YWL2 AC121598.2-201ENSMUST00000228376 2325 ntBASIC13.09□□□□□ -0.31
Ighv3-3A0A0A6YWL2 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC13.09□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC13.09□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Gm10461-201ENSMUST00000202073 4786 ntBASIC13.08□□□□□ -0.31
Ighv3-3A0A0A6YWL2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Gm43808-201ENSMUST00000202534 2065 ntBASIC13.08□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC13.08□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Gm7514-201ENSMUST00000209475 934 ntBASIC13.08□□□□□ -0.32
Ighv3-3A0A0A6YWL2 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC13.08□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Gm44544-201ENSMUST00000207052 1844 ntBASIC13.08□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC13.07□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Gm7291-201ENSMUST00000199147 382 ntBASIC13.07□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC13.07□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms