Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-4A0A075B6B4 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Trav6-4A0A075B6B4 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trav6-4A0A075B6B4 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trav6-4A0A075B6B4 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trav6-4A0A075B6B4 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-4A0A075B6B4 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-4A0A075B6B4 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-4A0A075B6B4 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-4A0A075B6B4 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC13.78□□□□□ -0.2
Trav6-4A0A075B6B4 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav6-4A0A075B6B4 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC13.78□□□□□ -0.2
Trav6-4A0A075B6B4 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC13.78□□□□□ -0.2
Trav6-4A0A075B6B4 Wnt10b-205ENSMUST00000226846 1204 ntBASIC13.78□□□□□ -0.2
Trav6-4A0A075B6B4 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-4A0A075B6B4 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-4A0A075B6B4 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-4A0A075B6B4 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-4A0A075B6B4 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-4A0A075B6B4 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-4A0A075B6B4 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-4A0A075B6B4 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav6-4A0A075B6B4 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-4A0A075B6B4 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trav6-4A0A075B6B4 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-4A0A075B6B4 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-4A0A075B6B4 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-4A0A075B6B4 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trav6-4A0A075B6B4 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav6-4A0A075B6B4 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav6-4A0A075B6B4 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Trav6-4A0A075B6B4 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-4A0A075B6B4 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC13.77□□□□□ -0.21
Trav6-4A0A075B6B4 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-4A0A075B6B4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-4A0A075B6B4 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-4A0A075B6B4 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Trav6-4A0A075B6B4 Zfp783-201ENSMUST00000095946 670 ntBASIC13.77□□□□□ -0.21
Trav6-4A0A075B6B4 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trav6-4A0A075B6B4 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-4A0A075B6B4 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-4A0A075B6B4 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-4A0A075B6B4 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-4A0A075B6B4 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-4A0A075B6B4 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trav6-4A0A075B6B4 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-4A0A075B6B4 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Trav6-4A0A075B6B4 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-4A0A075B6B4 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-4A0A075B6B4 Gm44544-201ENSMUST00000207052 1844 ntBASIC13.76□□□□□ -0.21
Trav6-4A0A075B6B4 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-4A0A075B6B4 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-4A0A075B6B4 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-4A0A075B6B4 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-4A0A075B6B4 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-4A0A075B6B4 Gm12896-201ENSMUST00000118430 226 ntBASIC13.76□□□□□ -0.21
Trav6-4A0A075B6B4 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Trav6-4A0A075B6B4 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-4A0A075B6B4 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Trav6-4A0A075B6B4 Gm38285-201ENSMUST00000192928 922 ntBASIC13.76□□□□□ -0.21
Trav6-4A0A075B6B4 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-4A0A075B6B4 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-4A0A075B6B4 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-4A0A075B6B4 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-4A0A075B6B4 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC13.76□□□□□ -0.21
Trav6-4A0A075B6B4 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-4A0A075B6B4 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-4A0A075B6B4 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-4A0A075B6B4 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-4A0A075B6B4 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-4A0A075B6B4 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-4A0A075B6B4 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-4A0A075B6B4 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-4A0A075B6B4 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-4A0A075B6B4 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Trav6-4A0A075B6B4 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-4A0A075B6B4 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-4A0A075B6B4 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-4A0A075B6B4 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-4A0A075B6B4 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-4A0A075B6B4 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav6-4A0A075B6B4 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-4A0A075B6B4 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
Trav6-4A0A075B6B4 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-4A0A075B6B4 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC13.75□□□□□ -0.21
Trav6-4A0A075B6B4 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC13.75□□□□□ -0.21
Trav6-4A0A075B6B4 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-4A0A075B6B4 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-4A0A075B6B4 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-4A0A075B6B4 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-4A0A075B6B4 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-4A0A075B6B4 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-4A0A075B6B4 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-4A0A075B6B4 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav6-4A0A075B6B4 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav6-4A0A075B6B4 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-4A0A075B6B4 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-4A0A075B6B4 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav6-4A0A075B6B4 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-4A0A075B6B4 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms