Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-2A0A075B649 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-2A0A075B649 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-2A0A075B649 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-2A0A075B649 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-2A0A075B649 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-2A0A075B649 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-2A0A075B649 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13-2A0A075B649 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-2A0A075B649 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav13-2A0A075B649 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-2A0A075B649 Gm19439-201ENSMUST00000198195 2273 ntBASIC12.03□□□□□ -0.48
Trav13-2A0A075B649 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-2A0A075B649 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-2A0A075B649 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav13-2A0A075B649 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-2A0A075B649 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-2A0A075B649 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav13-2A0A075B649 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-2A0A075B649 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-2A0A075B649 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-2A0A075B649 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-2A0A075B649 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav13-2A0A075B649 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-2A0A075B649 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Trav13-2A0A075B649 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-2A0A075B649 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-2A0A075B649 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-2A0A075B649 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-2A0A075B649 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-2A0A075B649 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav13-2A0A075B649 Gm37194-201ENSMUST00000193092 3031 ntBASIC12.03□□□□□ -0.48
Trav13-2A0A075B649 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Trav13-2A0A075B649 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-2A0A075B649 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-2A0A075B649 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-2A0A075B649 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav13-2A0A075B649 Zcchc6-207ENSMUST00000225576 2499 ntBASIC12.02□□□□□ -0.48
Trav13-2A0A075B649 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav13-2A0A075B649 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Trav13-2A0A075B649 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trav13-2A0A075B649 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trav13-2A0A075B649 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-2A0A075B649 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-2A0A075B649 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-2A0A075B649 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-2A0A075B649 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-2A0A075B649 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-2A0A075B649 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-2A0A075B649 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-2A0A075B649 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-2A0A075B649 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trav13-2A0A075B649 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav13-2A0A075B649 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-2A0A075B649 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-2A0A075B649 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-2A0A075B649 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-2A0A075B649 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-2A0A075B649 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-2A0A075B649 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-2A0A075B649 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trav13-2A0A075B649 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-2A0A075B649 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-2A0A075B649 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trav13-2A0A075B649 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav13-2A0A075B649 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-2A0A075B649 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-2A0A075B649 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-2A0A075B649 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-2A0A075B649 Fcho2-208ENSMUST00000224992 2964 ntBASIC12.01□□□□□ -0.49
Trav13-2A0A075B649 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trav13-2A0A075B649 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-2A0A075B649 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-2A0A075B649 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-2A0A075B649 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-2A0A075B649 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC12.01□□□□□ -0.49
Trav13-2A0A075B649 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-2A0A075B649 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-2A0A075B649 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-2A0A075B649 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav13-2A0A075B649 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav13-2A0A075B649 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav13-2A0A075B649 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav13-2A0A075B649 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav13-2A0A075B649 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-2A0A075B649 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-2A0A075B649 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav13-2A0A075B649 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-2A0A075B649 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-2A0A075B649 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-2A0A075B649 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-2A0A075B649 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13-2A0A075B649 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13-2A0A075B649 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13-2A0A075B649 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC12□□□□□ -0.49
Trav13-2A0A075B649 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13-2A0A075B649 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13-2A0A075B649 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13-2A0A075B649 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13-2A0A075B649 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms