Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6-7-dv9A0A075B639 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.87■□□□□ 0.13
Trav6-7-dv9A0A075B639 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6-7-dv9A0A075B639 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6-7-dv9A0A075B639 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6-7-dv9A0A075B639 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.87■□□□□ 0.13
Trav6-7-dv9A0A075B639 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6-7-dv9A0A075B639 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6-7-dv9A0A075B639 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6-7-dv9A0A075B639 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6-7-dv9A0A075B639 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6-7-dv9A0A075B639 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6-7-dv9A0A075B639 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6-7-dv9A0A075B639 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trav6-7-dv9A0A075B639 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trav6-7-dv9A0A075B639 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6-7-dv9A0A075B639 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6-7-dv9A0A075B639 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6-7-dv9A0A075B639 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6-7-dv9A0A075B639 Gm2399-201ENSMUST00000104944 225 ntBASIC15.86■□□□□ 0.13
Trav6-7-dv9A0A075B639 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
Trav6-7-dv9A0A075B639 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.86■□□□□ 0.13
Trav6-7-dv9A0A075B639 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6-7-dv9A0A075B639 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6-7-dv9A0A075B639 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Trav6-7-dv9A0A075B639 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6-7-dv9A0A075B639 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6-7-dv9A0A075B639 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6-7-dv9A0A075B639 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trav6-7-dv9A0A075B639 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6-7-dv9A0A075B639 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15.86■□□□□ 0.13
Trav6-7-dv9A0A075B639 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6-7-dv9A0A075B639 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6-7-dv9A0A075B639 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6-7-dv9A0A075B639 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.86■□□□□ 0.13
Trav6-7-dv9A0A075B639 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6-7-dv9A0A075B639 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6-7-dv9A0A075B639 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trav6-7-dv9A0A075B639 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Trav6-7-dv9A0A075B639 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trav6-7-dv9A0A075B639 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6-7-dv9A0A075B639 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6-7-dv9A0A075B639 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
Trav6-7-dv9A0A075B639 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6-7-dv9A0A075B639 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6-7-dv9A0A075B639 Mir5133-201ENSMUST00000174955 77 ntBASIC15.85■□□□□ 0.13
Trav6-7-dv9A0A075B639 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6-7-dv9A0A075B639 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC15.85■□□□□ 0.13
Trav6-7-dv9A0A075B639 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Trav6-7-dv9A0A075B639 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.85■□□□□ 0.13
Trav6-7-dv9A0A075B639 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6-7-dv9A0A075B639 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.85■□□□□ 0.13
Trav6-7-dv9A0A075B639 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6-7-dv9A0A075B639 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6-7-dv9A0A075B639 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-7-dv9A0A075B639 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-7-dv9A0A075B639 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-7-dv9A0A075B639 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-7-dv9A0A075B639 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-7-dv9A0A075B639 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-7-dv9A0A075B639 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
Trav6-7-dv9A0A075B639 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-7-dv9A0A075B639 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-7-dv9A0A075B639 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Trav6-7-dv9A0A075B639 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC15.84■□□□□ 0.13
Trav6-7-dv9A0A075B639 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-7-dv9A0A075B639 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
Trav6-7-dv9A0A075B639 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-7-dv9A0A075B639 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.84■□□□□ 0.13
Trav6-7-dv9A0A075B639 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-7-dv9A0A075B639 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-7-dv9A0A075B639 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trav6-7-dv9A0A075B639 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav6-7-dv9A0A075B639 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav6-7-dv9A0A075B639 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6-7-dv9A0A075B639 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6-7-dv9A0A075B639 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.83■□□□□ 0.12
Trav6-7-dv9A0A075B639 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.83■□□□□ 0.12
Trav6-7-dv9A0A075B639 Gm38285-201ENSMUST00000192928 922 ntBASIC15.83■□□□□ 0.12
Trav6-7-dv9A0A075B639 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trav6-7-dv9A0A075B639 Gm44549-201ENSMUST00000208351 577 ntBASIC15.83■□□□□ 0.12
Trav6-7-dv9A0A075B639 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trav6-7-dv9A0A075B639 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6-7-dv9A0A075B639 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.83■□□□□ 0.12
Trav6-7-dv9A0A075B639 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6-7-dv9A0A075B639 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Trav6-7-dv9A0A075B639 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6-7-dv9A0A075B639 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6-7-dv9A0A075B639 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-7-dv9A0A075B639 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-7-dv9A0A075B639 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trav6-7-dv9A0A075B639 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-7-dv9A0A075B639 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-7-dv9A0A075B639 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-7-dv9A0A075B639 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-7-dv9A0A075B639 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-7-dv9A0A075B639 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-7-dv9A0A075B639 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-7-dv9A0A075B639 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-7-dv9A0A075B639 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms