Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4d-3A0A075B625 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4d-3A0A075B625 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav4d-3A0A075B625 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4d-3A0A075B625 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4d-3A0A075B625 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4d-3A0A075B625 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4d-3A0A075B625 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Trav4d-3A0A075B625 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav4d-3A0A075B625 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4d-3A0A075B625 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4d-3A0A075B625 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4d-3A0A075B625 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav4d-3A0A075B625 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav4d-3A0A075B625 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav4d-3A0A075B625 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4d-3A0A075B625 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
Trav4d-3A0A075B625 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4d-3A0A075B625 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4d-3A0A075B625 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4d-3A0A075B625 Gm45774-201ENSMUST00000211992 2665 ntBASIC12.18□□□□□ -0.46
Trav4d-3A0A075B625 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4d-3A0A075B625 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4d-3A0A075B625 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4d-3A0A075B625 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4d-3A0A075B625 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4d-3A0A075B625 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4d-3A0A075B625 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav4d-3A0A075B625 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4d-3A0A075B625 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4d-3A0A075B625 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC12.18□□□□□ -0.46
Trav4d-3A0A075B625 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4d-3A0A075B625 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4d-3A0A075B625 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Trav4d-3A0A075B625 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4d-3A0A075B625 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4d-3A0A075B625 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4d-3A0A075B625 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav4d-3A0A075B625 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav4d-3A0A075B625 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4d-3A0A075B625 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4d-3A0A075B625 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4d-3A0A075B625 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4d-3A0A075B625 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav4d-3A0A075B625 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav4d-3A0A075B625 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav4d-3A0A075B625 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4d-3A0A075B625 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4d-3A0A075B625 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4d-3A0A075B625 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav4d-3A0A075B625 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trav4d-3A0A075B625 Gm37166-201ENSMUST00000195473 2474 ntBASIC12.17□□□□□ -0.46
Trav4d-3A0A075B625 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4d-3A0A075B625 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4d-3A0A075B625 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4d-3A0A075B625 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC12.17□□□□□ -0.46
Trav4d-3A0A075B625 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4d-3A0A075B625 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4d-3A0A075B625 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4d-3A0A075B625 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4d-3A0A075B625 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav4d-3A0A075B625 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC12.17□□□□□ -0.46
Trav4d-3A0A075B625 Gm12366-201ENSMUST00000121722 873 ntBASIC12.17□□□□□ -0.46
Trav4d-3A0A075B625 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4d-3A0A075B625 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC12.17□□□□□ -0.46
Trav4d-3A0A075B625 Gm5786-201ENSMUST00000085368 882 ntBASIC12.17□□□□□ -0.46
Trav4d-3A0A075B625 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav4d-3A0A075B625 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4d-3A0A075B625 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4d-3A0A075B625 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4d-3A0A075B625 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4d-3A0A075B625 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4d-3A0A075B625 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.17□□□□□ -0.46
Trav4d-3A0A075B625 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4d-3A0A075B625 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4d-3A0A075B625 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4d-3A0A075B625 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4d-3A0A075B625 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4d-3A0A075B625 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC12.16□□□□□ -0.46
Trav4d-3A0A075B625 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC12.16□□□□□ -0.46
Trav4d-3A0A075B625 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4d-3A0A075B625 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4d-3A0A075B625 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4d-3A0A075B625 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4d-3A0A075B625 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4d-3A0A075B625 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4d-3A0A075B625 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4d-3A0A075B625 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4d-3A0A075B625 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4d-3A0A075B625 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4d-3A0A075B625 Gm43566-201ENSMUST00000196851 808 ntBASIC12.16□□□□□ -0.46
Trav4d-3A0A075B625 Krt8-ps-201ENSMUST00000208495 945 ntBASIC12.16□□□□□ -0.46
Trav4d-3A0A075B625 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4d-3A0A075B625 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4d-3A0A075B625 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4d-3A0A075B625 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav4d-3A0A075B625 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4d-3A0A075B625 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4d-3A0A075B625 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4d-3A0A075B625 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms