Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4n-4A0A075B615 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC12.44□□□□□ -0.42
Trav4n-4A0A075B615 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav4n-4A0A075B615 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4n-4A0A075B615 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav4n-4A0A075B615 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4n-4A0A075B615 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav4n-4A0A075B615 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4n-4A0A075B615 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4n-4A0A075B615 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4n-4A0A075B615 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4n-4A0A075B615 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC12.44□□□□□ -0.42
Trav4n-4A0A075B615 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC12.44□□□□□ -0.42
Trav4n-4A0A075B615 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4n-4A0A075B615 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4n-4A0A075B615 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4n-4A0A075B615 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4n-4A0A075B615 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4n-4A0A075B615 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4n-4A0A075B615 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav4n-4A0A075B615 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4n-4A0A075B615 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4n-4A0A075B615 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4n-4A0A075B615 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Trav4n-4A0A075B615 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav4n-4A0A075B615 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4n-4A0A075B615 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4n-4A0A075B615 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trav4n-4A0A075B615 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4n-4A0A075B615 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4n-4A0A075B615 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4n-4A0A075B615 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4n-4A0A075B615 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4n-4A0A075B615 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4n-4A0A075B615 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav4n-4A0A075B615 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4n-4A0A075B615 Gm45444-201ENSMUST00000211394 898 ntBASIC12.43□□□□□ -0.42
Trav4n-4A0A075B615 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4n-4A0A075B615 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4n-4A0A075B615 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trav4n-4A0A075B615 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4n-4A0A075B615 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4n-4A0A075B615 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4n-4A0A075B615 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav4n-4A0A075B615 Dancr-204ENSMUST00000132389 2347 ntBASIC12.43□□□□□ -0.42
Trav4n-4A0A075B615 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trav4n-4A0A075B615 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4n-4A0A075B615 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4n-4A0A075B615 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4n-4A0A075B615 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4n-4A0A075B615 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4n-4A0A075B615 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4n-4A0A075B615 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4n-4A0A075B615 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4n-4A0A075B615 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav4n-4A0A075B615 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4n-4A0A075B615 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4n-4A0A075B615 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4n-4A0A075B615 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav4n-4A0A075B615 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4n-4A0A075B615 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC12.42□□□□□ -0.42
Trav4n-4A0A075B615 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4n-4A0A075B615 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4n-4A0A075B615 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4n-4A0A075B615 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4n-4A0A075B615 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4n-4A0A075B615 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav4n-4A0A075B615 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC12.42□□□□□ -0.42
Trav4n-4A0A075B615 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4n-4A0A075B615 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4n-4A0A075B615 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4n-4A0A075B615 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Trav4n-4A0A075B615 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4n-4A0A075B615 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav4n-4A0A075B615 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav4n-4A0A075B615 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4n-4A0A075B615 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4n-4A0A075B615 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav4n-4A0A075B615 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4n-4A0A075B615 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4n-4A0A075B615 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4n-4A0A075B615 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Trav4n-4A0A075B615 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4n-4A0A075B615 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4n-4A0A075B615 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4n-4A0A075B615 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4n-4A0A075B615 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4n-4A0A075B615 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav4n-4A0A075B615 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC12.41□□□□□ -0.42
Trav4n-4A0A075B615 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4n-4A0A075B615 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4n-4A0A075B615 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4n-4A0A075B615 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4n-4A0A075B615 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4n-4A0A075B615 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav4n-4A0A075B615 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4n-4A0A075B615 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4n-4A0A075B615 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4n-4A0A075B615 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4n-4A0A075B615 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms