Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Sec16b-202ENSMUST00000086130 4661 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Sox18P43680 Atp6v0a1-202ENSMUST00000092663 3813 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Sox18P43680 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Sox18P43680 Cfb-206ENSMUST00000154526 2397 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Sox18P43680 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC7.2□□□□□ -1.26
Sox18P43680 Gm28839-201ENSMUST00000189579 2171 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Sox18P43680 Ranbp9-208ENSMUST00000222651 1951 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Sox18P43680 Synj2bp-204ENSMUST00000164431 3305 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Sox18P43680 Mtrf1-201ENSMUST00000022600 1799 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Sox18P43680 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Sox18P43680 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Sox18P43680 C87436-202ENSMUST00000113698 2922 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Sox18P43680 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Sox18P43680 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Sox18P43680 Krba1-204ENSMUST00000114572 4323 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Sox18P43680 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC7.2□□□□□ -1.26
Sox18P43680 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Sox18P43680 Syne1-202ENSMUST00000095899 3443 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Sox18P43680 Kif14-203ENSMUST00000189413 8943 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Sox18P43680 Lca5-201ENSMUST00000034791 4160 ntAPPRIS P4 TSL 1 (best) BASIC7.19□□□□□ -1.26
Sox18P43680 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Sox18P43680 Olfr156-204ENSMUST00000215406 1850 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Sox18P43680 Tex21-201ENSMUST00000021453 2137 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Sox18P43680 Btbd10-202ENSMUST00000117577 2384 ntAPPRIS ALT1 TSL 5 BASIC7.19□□□□□ -1.26
Sox18P43680 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Sox18P43680 Lyve1-201ENSMUST00000033050 2893 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Sox18P43680 Ccdc39-201ENSMUST00000029222 3606 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Sox18P43680 Gm18180-201ENSMUST00000187562 1484 ntBASIC7.19□□□□□ -1.26
Sox18P43680 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Sox18P43680 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Sox18P43680 Pik3r4-201ENSMUST00000065778 4711 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Sox18P43680 Fam13a-201ENSMUST00000089860 5786 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Sox18P43680 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
Sox18P43680 Gm12646-201ENSMUST00000119144 238 ntBASIC7.19□□□□□ -1.26
Sox18P43680 Gm6987-201ENSMUST00000119319 428 ntBASIC7.19□□□□□ -1.26
Sox18P43680 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC7.19□□□□□ -1.26
Sox18P43680 Gm16523-201ENSMUST00000121253 592 ntBASIC7.19□□□□□ -1.26
Sox18P43680 Gm12369-201ENSMUST00000121343 942 ntBASIC7.19□□□□□ -1.26
Sox18P43680 Gm15538-201ENSMUST00000121410 313 ntBASIC7.19□□□□□ -1.26
Sox18P43680 Gm14362-201ENSMUST00000121679 273 ntBASIC7.19□□□□□ -1.26
Sox18P43680 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Sox18P43680 Gm15254-201ENSMUST00000149567 273 ntBASIC7.19□□□□□ -1.26
Sox18P43680 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC7.19□□□□□ -1.26
Sox18P43680 Gm16113-201ENSMUST00000159629 372 ntBASIC7.19□□□□□ -1.26
Sox18P43680 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC7.19□□□□□ -1.26
Sox18P43680 Fth-ps2-201ENSMUST00000168364 516 ntBASIC7.19□□□□□ -1.26
Sox18P43680 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC7.19□□□□□ -1.26
Sox18P43680 Gm20396-201ENSMUST00000173358 745 ntBASIC7.19□□□□□ -1.26
Sox18P43680 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Sox18P43680 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Sox18P43680 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Sox18P43680 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Sox18P43680 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Sox18P43680 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Sox18P43680 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Sox18P43680 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Sox18P43680 Gm8192-201ENSMUST00000182196 958 ntBASIC7.19□□□□□ -1.26
Sox18P43680 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Sox18P43680 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Sox18P43680 Gm37743-201ENSMUST00000194645 376 ntBASIC7.19□□□□□ -1.26
Sox18P43680 Gm5983-201ENSMUST00000197739 770 ntBASIC7.19□□□□□ -1.26
Sox18P43680 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Sox18P43680 Gm3266-201ENSMUST00000217832 591 ntBASIC7.19□□□□□ -1.26
Sox18P43680 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC7.19□□□□□ -1.26
Sox18P43680 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC7.19□□□□□ -1.26
Sox18P43680 AC154257.2-201ENSMUST00000224166 340 ntBASIC7.19□□□□□ -1.26
Sox18P43680 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Sox18P43680 Gm23679-201ENSMUST00000083161 119 ntBASIC7.19□□□□□ -1.26
Sox18P43680 Gm15990-201ENSMUST00000132223 3321 ntTSL 5 BASIC7.19□□□□□ -1.26
Sox18P43680 AC154828.1-201ENSMUST00000220696 2810 ntBASIC7.19□□□□□ -1.26
Sox18P43680 Epb41l5-203ENSMUST00000163147 3370 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Sox18P43680 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Sox18P43680 Gm18957-201ENSMUST00000197623 1813 ntBASIC7.19□□□□□ -1.26
Sox18P43680 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Sox18P43680 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Sox18P43680 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Sox18P43680 Olfr958-202ENSMUST00000215505 3514 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Sox18P43680 Gm28469-201ENSMUST00000186374 2166 ntTSL 5 BASIC7.19□□□□□ -1.26
Sox18P43680 Gm28134-201ENSMUST00000188690 2166 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Sox18P43680 Gm37075-201ENSMUST00000191888 2166 ntTSL 5 BASIC7.19□□□□□ -1.26
Sox18P43680 Gm37574-201ENSMUST00000194264 2166 ntTSL 5 BASIC7.19□□□□□ -1.26
Sox18P43680 Iars-206ENSMUST00000165316 4426 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Sox18P43680 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC7.19□□□□□ -1.26
Sox18P43680 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Sox18P43680 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Sox18P43680 Large1-201ENSMUST00000004497 3669 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Sox18P43680 Amy1-202ENSMUST00000106540 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Sox18P43680 Gsdmc4-202ENSMUST00000188108 2085 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Sox18P43680 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Sox18P43680 Bicc1-202ENSMUST00000131445 3005 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Sox18P43680 Dennd6a-205ENSMUST00000224378 2424 ntBASIC7.18□□□□□ -1.26
Sox18P43680 Map1b-201ENSMUST00000064762 11808 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Sox18P43680 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC7.18□□□□□ -1.26
Sox18P43680 Slc5a7-201ENSMUST00000095712 5176 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Sox18P43680 Gm15101-201ENSMUST00000178818 1502 ntBASIC7.18□□□□□ -1.26
Sox18P43680 Abcg8-201ENSMUST00000045714 3667 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
Sox18P43680 Gm42551-201ENSMUST00000197701 1573 ntBASIC7.18□□□□□ -1.26
Sox18P43680 Cmah-209ENSMUST00000224953 2221 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Sox18P43680 n-R5s16-201ENSMUST00000104555 119 ntBASIC7.18□□□□□ -1.26
Sox18P43680 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC7.18□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms