Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm25057-201ENSMUST00000157366 88 ntBASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Mir1981-201ENSMUST00000157934 82 ntBASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Gm16297-201ENSMUST00000161466 459 ntBASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Gm20615-201ENSMUST00000177503 705 ntBASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Gm17786-201ENSMUST00000182000 427 ntBASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 1700028B04Rik-201ENSMUST00000186274 555 ntBASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Gm28956-201ENSMUST00000189047 427 ntBASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Ighv1-17-201ENSMUST00000194435 350 ntBASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Gm29950-201ENSMUST00000195273 237 ntBASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Gm43487-201ENSMUST00000200331 1031 ntBASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Gm44952-201ENSMUST00000204443 433 ntBASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Gm44036-201ENSMUST00000204551 336 ntTSL 3 BASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Gm44112-201ENSMUST00000204787 372 ntBASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 AC159472.1-201ENSMUST00000218178 463 ntBASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Gm18628-201ENSMUST00000220584 475 ntBASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 AC211878.1-201ENSMUST00000221668 474 ntBASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 AC154329.2-201ENSMUST00000225257 383 ntBASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 CT009733.1-201ENSMUST00000225322 425 ntBASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 AC154506.3-201ENSMUST00000225417 213 ntBASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Gm10259-201ENSMUST00000091289 1590 ntBASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Gm43880-201ENSMUST00000203635 2162 ntBASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Gm8734-201ENSMUST00000211669 1312 ntBASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Gm3089-201ENSMUST00000200804 1395 ntBASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Gm3302-201ENSMUST00000201462 1395 ntBASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
Pcdh1F7BJK1 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 AC164297.2-201ENSMUST00000224388 1508 ntBASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm23692-201ENSMUST00000101881 160 ntBASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm26146-201ENSMUST00000104478 185 ntBASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm12903-201ENSMUST00000121015 544 ntBASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm6568-201ENSMUST00000122274 697 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms