Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
Nup88Q8CEC0 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Nup88Q8CEC0 Gm22499-201ENSMUST00000104501 135 ntBASIC6.71□□□□□ -1.34
Nup88Q8CEC0 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Nup88Q8CEC0 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Nup88Q8CEC0 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC6.71□□□□□ -1.34
Nup88Q8CEC0 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC6.71□□□□□ -1.34
Nup88Q8CEC0 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC6.71□□□□□ -1.34
Nup88Q8CEC0 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC6.71□□□□□ -1.34
Nup88Q8CEC0 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
Nup88Q8CEC0 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Nup88Q8CEC0 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC6.71□□□□□ -1.34
Nup88Q8CEC0 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC6.71□□□□□ -1.34
Nup88Q8CEC0 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Nup88Q8CEC0 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
Nup88Q8CEC0 Gm27409-201ENSMUST00000184727 80 ntBASIC6.71□□□□□ -1.34
Nup88Q8CEC0 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC6.71□□□□□ -1.34
Nup88Q8CEC0 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC6.71□□□□□ -1.34
Nup88Q8CEC0 Gm8613-201ENSMUST00000220383 1077 ntBASIC6.71□□□□□ -1.34
Nup88Q8CEC0 AC124826.1-201ENSMUST00000221651 325 ntBASIC6.71□□□□□ -1.34
Nup88Q8CEC0 CU062626.1-201ENSMUST00000225248 505 ntBASIC6.71□□□□□ -1.34
Nup88Q8CEC0 AC107711.2-203ENSMUST00000227827 762 ntBASIC6.71□□□□□ -1.34
Nup88Q8CEC0 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Nup88Q8CEC0 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Nup88Q8CEC0 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Nup88Q8CEC0 AC174459.1-201ENSMUST00000224476 1943 ntBASIC6.71□□□□□ -1.34
Nup88Q8CEC0 Gm42725-201ENSMUST00000199296 4193 ntBASIC6.71□□□□□ -1.34
Nup88Q8CEC0 Gm4954-201ENSMUST00000135069 1601 ntBASIC6.71□□□□□ -1.34
Nup88Q8CEC0 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Nup88Q8CEC0 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Nup88Q8CEC0 AC124183.1-201ENSMUST00000222367 2135 ntBASIC6.71□□□□□ -1.34
Nup88Q8CEC0 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Nup88Q8CEC0 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Nup88Q8CEC0 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Nup88Q8CEC0 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC6.71□□□□□ -1.34
Nup88Q8CEC0 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Nup88Q8CEC0 Gm37717-201ENSMUST00000192647 3027 ntBASIC6.71□□□□□ -1.34
Nup88Q8CEC0 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Nup88Q8CEC0 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC6.71□□□□□ -1.34
Nup88Q8CEC0 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Nup88Q8CEC0 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Gm45177-201ENSMUST00000209104 2307 ntBASIC6.7□□□□□ -1.34
Nup88Q8CEC0 AC121942.1-201ENSMUST00000224459 2891 ntBASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Gm24541-201ENSMUST00000103871 96 ntBASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Gm13451-201ENSMUST00000117649 592 ntBASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Gm11984-201ENSMUST00000118142 766 ntBASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Gm15048-201ENSMUST00000118201 954 ntBASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Gm15233-201ENSMUST00000118747 400 ntBASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Gm26372-201ENSMUST00000157831 236 ntBASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Gm8323-201ENSMUST00000168436 1201 ntBASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Gm2877-201ENSMUST00000178248 1204 ntBASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Gm8324-201ENSMUST00000178911 1204 ntBASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Gm2871-201ENSMUST00000179984 1204 ntBASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Mir219c-201ENSMUST00000199860 60 ntBASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Gm7181-201ENSMUST00000202197 434 ntBASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Gm19900-201ENSMUST00000207285 576 ntBASIC6.7□□□□□ -1.34
Nup88Q8CEC0 AC132121.1-201ENSMUST00000220774 332 ntBASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Gm36501-201ENSMUST00000221857 745 ntBASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Rybp-ps-201ENSMUST00000069489 681 ntBASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Gm21955-201ENSMUST00000194137 4968 ntBASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Gm6125-201ENSMUST00000217983 3472 ntBASIC6.7□□□□□ -1.34
Nup88Q8CEC0 Gm19125-201ENSMUST00000188408 1383 ntBASIC6.69□□□□□ -1.34
Nup88Q8CEC0 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Nup88Q8CEC0 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Nup88Q8CEC0 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Nup88Q8CEC0 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Nup88Q8CEC0 AC107645.1-201ENSMUST00000228660 1810 ntBASIC6.69□□□□□ -1.34
Nup88Q8CEC0 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC6.69□□□□□ -1.34
Nup88Q8CEC0 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Nup88Q8CEC0 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Nup88Q8CEC0 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Nup88Q8CEC0 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms