Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Gm13114-201ENSMUST00000117605 106 ntBASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Gm14790-201ENSMUST00000117760 1293 ntBASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Gm7931-201ENSMUST00000121537 271 ntBASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Gm13531-201ENSMUST00000121893 543 ntBASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Gm9671-201ENSMUST00000171502 547 ntBASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Gm20453-201ENSMUST00000173968 226 ntBASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Gm24103-201ENSMUST00000174930 77 ntBASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Gm22254-201ENSMUST00000179186 110 ntBASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Gm29124-201ENSMUST00000186576 452 ntBASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Gm28066-201ENSMUST00000188657 472 ntBASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Gm29489-201ENSMUST00000188934 324 ntBASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Gm28883-201ENSMUST00000189256 369 ntBASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Ighv3-2-201ENSMUST00000191842 349 ntBASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Gm42776-201ENSMUST00000198031 406 ntBASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Gm43743-202ENSMUST00000198353 491 ntBASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Gm43222-201ENSMUST00000199013 603 ntBASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Gm5990-201ENSMUST00000203126 746 ntBASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Gm44251-201ENSMUST00000204963 442 ntBASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Gm44277-201ENSMUST00000205128 649 ntBASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Gm19033-201ENSMUST00000208516 964 ntBASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 CT009556.1-201ENSMUST00000227282 449 ntBASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 AC170810.1-201ENSMUST00000228267 672 ntBASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 AC154738.4-201ENSMUST00000228310 414 ntBASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Gm6990-201ENSMUST00000086830 348 ntBASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Gm45632-201ENSMUST00000211532 1888 ntBASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ccdc40Q8BI79 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ccdc40Q8BI79 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ccdc40Q8BI79 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Ccdc40Q8BI79 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC6.03□□□□□ -1.44
Ccdc40Q8BI79 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ccdc40Q8BI79 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ccdc40Q8BI79 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
Ccdc40Q8BI79 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ccdc40Q8BI79 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Ccdc40Q8BI79 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Ccdc40Q8BI79 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ccdc40Q8BI79 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ccdc40Q8BI79 Gm6446-201ENSMUST00000120604 818 ntBASIC6.03□□□□□ -1.44
Ccdc40Q8BI79 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC6.03□□□□□ -1.44
Ccdc40Q8BI79 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC6.03□□□□□ -1.44
Ccdc40Q8BI79 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
Ccdc40Q8BI79 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC6.03□□□□□ -1.44
Ccdc40Q8BI79 Gm26346-201ENSMUST00000157525 329 ntBASIC6.03□□□□□ -1.44
Ccdc40Q8BI79 Gm24741-201ENSMUST00000158857 106 ntBASIC6.03□□□□□ -1.44
Ccdc40Q8BI79 Gm17048-201ENSMUST00000179266 847 ntBASIC6.03□□□□□ -1.44
Ccdc40Q8BI79 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
Ccdc40Q8BI79 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ccdc40Q8BI79 Gm37716-201ENSMUST00000193553 947 ntBASIC6.03□□□□□ -1.44
Ccdc40Q8BI79 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
Ccdc40Q8BI79 Gm8930-201ENSMUST00000201693 768 ntBASIC6.03□□□□□ -1.44
Ccdc40Q8BI79 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC6.03□□□□□ -1.44
Ccdc40Q8BI79 Gm44219-201ENSMUST00000203005 273 ntBASIC6.03□□□□□ -1.44
Ccdc40Q8BI79 AC153505.2-201ENSMUST00000217741 277 ntBASIC6.03□□□□□ -1.44
Ccdc40Q8BI79 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC6.03□□□□□ -1.44
Ccdc40Q8BI79 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Ccdc40Q8BI79 Gm34165-201ENSMUST00000222012 1174 ntBASIC6.03□□□□□ -1.44
Ccdc40Q8BI79 AC154633.1-201ENSMUST00000223276 449 ntBASIC6.03□□□□□ -1.44
Ccdc40Q8BI79 AV026068-216ENSMUST00000223874 328 ntBASIC6.03□□□□□ -1.44
Ccdc40Q8BI79 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Ccdc40Q8BI79 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ccdc40Q8BI79 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Ccdc40Q8BI79 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ccdc40Q8BI79 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Ccdc40Q8BI79 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ccdc40Q8BI79 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC6.03□□□□□ -1.44
Ccdc40Q8BI79 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Ccdc40Q8BI79 Gm19113-201ENSMUST00000217552 1828 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 139.7 ms