Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC4.78□□□□□ -1.64
Nkx2-1P50220 Gm37375-201ENSMUST00000193859 387 ntBASIC4.78□□□□□ -1.64
Nkx2-1P50220 Gm37385-201ENSMUST00000195223 387 ntBASIC4.78□□□□□ -1.64
Nkx2-1P50220 Gm37614-201ENSMUST00000195645 210 ntBASIC4.78□□□□□ -1.64
Nkx2-1P50220 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx2-1P50220 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC4.78□□□□□ -1.64
Nkx2-1P50220 AC117240.1-201ENSMUST00000199436 61 ntBASIC4.78□□□□□ -1.64
Nkx2-1P50220 Gm43203-201ENSMUST00000200130 558 ntBASIC4.78□□□□□ -1.64
Nkx2-1P50220 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC4.78□□□□□ -1.64
Nkx2-1P50220 Gm43798-201ENSMUST00000202056 394 ntBASIC4.78□□□□□ -1.64
Nkx2-1P50220 Gm17834-201ENSMUST00000204322 891 ntBASIC4.78□□□□□ -1.64
Nkx2-1P50220 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC4.78□□□□□ -1.64
Nkx2-1P50220 Gm4587-201ENSMUST00000209135 637 ntBASIC4.78□□□□□ -1.64
Nkx2-1P50220 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC4.78□□□□□ -1.64
Nkx2-1P50220 Gm4803-201ENSMUST00000218729 1279 ntBASIC4.78□□□□□ -1.64
Nkx2-1P50220 Gm46191-201ENSMUST00000218899 433 ntBASIC4.78□□□□□ -1.64
Nkx2-1P50220 AC118230.1-201ENSMUST00000220196 656 ntBASIC4.78□□□□□ -1.64
Nkx2-1P50220 AC154851.1-201ENSMUST00000221591 655 ntBASIC4.78□□□□□ -1.64
Nkx2-1P50220 AC139197.1-201ENSMUST00000228332 813 ntBASIC4.78□□□□□ -1.64
Nkx2-1P50220 AC135086.1-201ENSMUST00000228621 817 ntBASIC4.78□□□□□ -1.64
Nkx2-1P50220 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Nkx2-1P50220 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC4.78□□□□□ -1.64
Nkx2-1P50220 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx2-1P50220 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx2-1P50220 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Nkx2-1P50220 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Nkx2-1P50220 Gm10145-201ENSMUST00000077776 462 ntBASIC4.78□□□□□ -1.64
Nkx2-1P50220 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Nkx2-1P50220 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Nkx2-1P50220 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx2-1P50220 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Nkx2-1P50220 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx2-1P50220 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx2-1P50220 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx2-1P50220 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx2-1P50220 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx2-1P50220 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx2-1P50220 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx2-1P50220 AC121942.1-201ENSMUST00000224459 2891 ntBASIC4.78□□□□□ -1.64
Nkx2-1P50220 Pramel-201ENSMUST00000118979 1383 ntBASIC4.78□□□□□ -1.64
Nkx2-1P50220 AW046200-203ENSMUST00000211787 2479 ntBASIC4.78□□□□□ -1.64
Nkx2-1P50220 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC4.77□□□□□ -1.65
Nkx2-1P50220 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Nkx2-1P50220 AC166358.5-201ENSMUST00000220706 1302 ntBASIC4.77□□□□□ -1.65
Nkx2-1P50220 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Nkx2-1P50220 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Nkx2-1P50220 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Nkx2-1P50220 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC4.77□□□□□ -1.65
Nkx2-1P50220 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC4.77□□□□□ -1.65
Nkx2-1P50220 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
Nkx2-1P50220 Gm37488-201ENSMUST00000195434 3374 ntBASIC4.77□□□□□ -1.65
Nkx2-1P50220 Gm37049-201ENSMUST00000194356 1983 ntBASIC4.77□□□□□ -1.65
Nkx2-1P50220 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC4.77□□□□□ -1.65
Nkx2-1P50220 Gm42645-201ENSMUST00000201573 1627 ntBASIC4.77□□□□□ -1.65
Nkx2-1P50220 Gm37101-201ENSMUST00000191656 3660 ntBASIC4.77□□□□□ -1.65
Nkx2-1P50220 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Nkx2-1P50220 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC4.77□□□□□ -1.65
Nkx2-1P50220 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Nkx2-1P50220 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Nkx2-1P50220 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Nkx2-1P50220 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Nkx2-1P50220 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Nkx2-1P50220 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
Nkx2-1P50220 Gm6884-201ENSMUST00000119318 615 ntBASIC4.77□□□□□ -1.65
Nkx2-1P50220 Gm11472-201ENSMUST00000121305 556 ntBASIC4.77□□□□□ -1.65
Nkx2-1P50220 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Nkx2-1P50220 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Nkx2-1P50220 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC4.77□□□□□ -1.65
Nkx2-1P50220 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC4.77□□□□□ -1.65
Nkx2-1P50220 Gm12504-202ENSMUST00000148026 306 ntBASIC4.77□□□□□ -1.65
Nkx2-1P50220 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC4.77□□□□□ -1.65
Nkx2-1P50220 Gm23467-201ENSMUST00000157127 159 ntBASIC4.77□□□□□ -1.65
Nkx2-1P50220 Mirt2-201ENSMUST00000175179 285 ntBASIC4.77□□□□□ -1.65
Nkx2-1P50220 Gm4832-201ENSMUST00000182679 399 ntBASIC4.77□□□□□ -1.65
Nkx2-1P50220 Gm8581-201ENSMUST00000188636 890 ntBASIC4.77□□□□□ -1.65
Nkx2-1P50220 Gm18348-201ENSMUST00000191227 820 ntBASIC4.77□□□□□ -1.65
Nkx2-1P50220 Gm38237-201ENSMUST00000193366 376 ntBASIC4.77□□□□□ -1.65
Nkx2-1P50220 Ighv1-29-201ENSMUST00000194116 342 ntBASIC4.77□□□□□ -1.65
Nkx2-1P50220 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC4.77□□□□□ -1.65
Nkx2-1P50220 Gm18747-201ENSMUST00000198129 648 ntBASIC4.77□□□□□ -1.65
Nkx2-1P50220 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Nkx2-1P50220 Gm44316-201ENSMUST00000199274 97 ntBASIC4.77□□□□□ -1.65
Nkx2-1P50220 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC4.77□□□□□ -1.65
Nkx2-1P50220 Gm9038-201ENSMUST00000203400 604 ntBASIC4.77□□□□□ -1.65
Nkx2-1P50220 Gm30646-201ENSMUST00000207662 180 ntBASIC4.77□□□□□ -1.65
Nkx2-1P50220 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC4.77□□□□□ -1.65
Nkx2-1P50220 Gm8137-201ENSMUST00000218997 463 ntBASIC4.77□□□□□ -1.65
Nkx2-1P50220 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Nkx2-1P50220 AC154335.1-201ENSMUST00000224744 395 ntBASIC4.77□□□□□ -1.65
Nkx2-1P50220 AC158388.1-201ENSMUST00000225441 256 ntBASIC4.77□□□□□ -1.65
Nkx2-1P50220 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Nkx2-1P50220 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Nkx2-1P50220 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC4.77□□□□□ -1.65
Nkx2-1P50220 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Nkx2-1P50220 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Nkx2-1P50220 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Nkx2-1P50220 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Nkx2-1P50220 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
Nkx2-1P50220 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Nkx2-1P50220 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 121.1 ms