Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC7.78□□□□□ -1.16
Col18a1P39061 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Col18a1P39061 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC7.78□□□□□ -1.16
Col18a1P39061 Gm18427-201ENSMUST00000195422 515 ntBASIC7.78□□□□□ -1.16
Col18a1P39061 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC7.78□□□□□ -1.16
Col18a1P39061 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC7.78□□□□□ -1.16
Col18a1P39061 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Col18a1P39061 Gm18160-201ENSMUST00000214279 827 ntBASIC7.78□□□□□ -1.16
Col18a1P39061 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC7.78□□□□□ -1.16
Col18a1P39061 AC152979.3-201ENSMUST00000217720 479 ntBASIC7.78□□□□□ -1.16
Col18a1P39061 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col18a1P39061 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col18a1P39061 Dlg2-203ENSMUST00000107193 4910 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Col18a1P39061 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Col18a1P39061 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC7.78□□□□□ -1.16
Col18a1P39061 Olfr1564-204ENSMUST00000213751 5418 ntAPPRIS ALT1 TSL 5 BASIC7.78□□□□□ -1.16
Col18a1P39061 Gm30340-201ENSMUST00000191898 2198 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Col18a1P39061 Myt1-203ENSMUST00000108757 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col18a1P39061 AC155298.1-201ENSMUST00000225350 3250 ntBASIC7.78□□□□□ -1.16
Col18a1P39061 Slfn4-202ENSMUST00000167596 3703 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col18a1P39061 Ebpl-201ENSMUST00000022494 10092 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col18a1P39061 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Col18a1P39061 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC7.77□□□□□ -1.16
Col18a1P39061 Gm10743-201ENSMUST00000219611 2358 ntBASIC7.77□□□□□ -1.16
Col18a1P39061 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
Col18a1P39061 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col18a1P39061 Atf6-201ENSMUST00000027974 7246 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col18a1P39061 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col18a1P39061 Gm11278-201ENSMUST00000121002 997 ntBASIC7.77□□□□□ -1.17
Col18a1P39061 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC7.77□□□□□ -1.17
Col18a1P39061 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC7.77□□□□□ -1.17
Col18a1P39061 Gm25942-201ENSMUST00000180080 110 ntBASIC7.77□□□□□ -1.17
Col18a1P39061 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC7.77□□□□□ -1.17
Col18a1P39061 Gm27715-201ENSMUST00000184714 260 ntBASIC7.77□□□□□ -1.17
Col18a1P39061 Gm18357-201ENSMUST00000188184 580 ntBASIC7.77□□□□□ -1.17
Col18a1P39061 Gm19066-201ENSMUST00000193232 1078 ntBASIC7.77□□□□□ -1.17
Col18a1P39061 Gm44212-201ENSMUST00000205016 897 ntBASIC7.77□□□□□ -1.17
Col18a1P39061 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC7.77□□□□□ -1.17
Col18a1P39061 Gm2961-201ENSMUST00000211074 772 ntBASIC7.77□□□□□ -1.17
Col18a1P39061 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC7.77□□□□□ -1.17
Col18a1P39061 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC7.77□□□□□ -1.17
Col18a1P39061 CT956049.1-201ENSMUST00000225671 763 ntBASIC7.77□□□□□ -1.17
Col18a1P39061 AC152394.2-202ENSMUST00000228503 1064 ntBASIC7.77□□□□□ -1.17
Col18a1P39061 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Col18a1P39061 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Col18a1P39061 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col18a1P39061 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC7.77□□□□□ -1.17
Col18a1P39061 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col18a1P39061 Myo6-201ENSMUST00000035889 7871 ntTSL 5 BASIC7.77□□□□□ -1.17
Col18a1P39061 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col18a1P39061 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Col18a1P39061 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC7.77□□□□□ -1.17
Col18a1P39061 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Col18a1P39061 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC7.77□□□□□ -1.17
Col18a1P39061 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC7.77□□□□□ -1.17
Col18a1P39061 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC7.77□□□□□ -1.17
Col18a1P39061 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC7.77□□□□□ -1.17
Col18a1P39061 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col18a1P39061 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col18a1P39061 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col18a1P39061 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Col18a1P39061 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col18a1P39061 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col18a1P39061 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col18a1P39061 Vmn1r51-208ENSMUST00000227876 4160 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Col18a1P39061 Gm36814-201ENSMUST00000197457 1755 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Col18a1P39061 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col18a1P39061 Gm14943-201ENSMUST00000118056 546 ntBASIC7.76□□□□□ -1.17
Col18a1P39061 Gm4234-201ENSMUST00000119747 714 ntBASIC7.76□□□□□ -1.17
Col18a1P39061 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC7.76□□□□□ -1.17
Col18a1P39061 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Col18a1P39061 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC7.76□□□□□ -1.17
Col18a1P39061 Gm27875-201ENSMUST00000184425 123 ntBASIC7.76□□□□□ -1.17
Col18a1P39061 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC7.76□□□□□ -1.17
Col18a1P39061 Gm18541-201ENSMUST00000215935 538 ntBASIC7.76□□□□□ -1.17
Col18a1P39061 Gm18043-201ENSMUST00000216741 739 ntBASIC7.76□□□□□ -1.17
Col18a1P39061 Gm3213-201ENSMUST00000219296 441 ntBASIC7.76□□□□□ -1.17
Col18a1P39061 AC132317.2-201ENSMUST00000227301 519 ntBASIC7.76□□□□□ -1.17
Col18a1P39061 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Col18a1P39061 Gm26437-201ENSMUST00000082595 105 ntBASIC7.76□□□□□ -1.17
Col18a1P39061 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Col18a1P39061 Gm43014-201ENSMUST00000198568 2443 ntBASIC7.76□□□□□ -1.17
Col18a1P39061 BC024978-201ENSMUST00000108379 7247 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Col18a1P39061 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Col18a1P39061 Celsr3-201ENSMUST00000024238 11547 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Col18a1P39061 Gm43328-201ENSMUST00000198544 1434 ntBASIC7.76□□□□□ -1.17
Col18a1P39061 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Col18a1P39061 Gm38372-201ENSMUST00000194854 4028 ntBASIC7.76□□□□□ -1.17
Col18a1P39061 Gm37551-201ENSMUST00000195556 2861 ntBASIC7.76□□□□□ -1.17
Col18a1P39061 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Col18a1P39061 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Col18a1P39061 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Col18a1P39061 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC7.76□□□□□ -1.17
Col18a1P39061 Cntrl-203ENSMUST00000113032 7085 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Col18a1P39061 Gm43031-201ENSMUST00000198500 1887 ntBASIC7.76□□□□□ -1.17
Col18a1P39061 Rgs8-202ENSMUST00000111810 5614 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Col18a1P39061 Nrk-201ENSMUST00000064937 6604 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Col18a1P39061 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC7.76□□□□□ -1.17
Col18a1P39061 Gm45528-201ENSMUST00000209854 3145 ntBASIC7.76□□□□□ -1.17
Col18a1P39061 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms