Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 AC155710.1-201ENSMUST00000219913 1353 ntBASIC4.77□□□□□ -1.65
Cdx1P18111 Gm45149-201ENSMUST00000206459 2172 ntBASIC4.77□□□□□ -1.65
Cdx1P18111 Gm45493-201ENSMUST00000209494 3948 ntBASIC4.77□□□□□ -1.65
Cdx1P18111 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Cdx1P18111 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Cdx1P18111 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Cdx1P18111 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Cdx1P18111 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
Cdx1P18111 Gm37114-201ENSMUST00000195065 1804 ntBASIC4.76□□□□□ -1.65
Cdx1P18111 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Cdx1P18111 Gm9077-201ENSMUST00000210657 2298 ntBASIC4.76□□□□□ -1.65
Cdx1P18111 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Cdx1P18111 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
Cdx1P18111 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Cdx1P18111 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Cdx1P18111 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC4.76□□□□□ -1.65
Cdx1P18111 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Cdx1P18111 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Cdx1P18111 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Cdx1P18111 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Cdx1P18111 Gm16007-201ENSMUST00000117837 286 ntBASIC4.76□□□□□ -1.65
Cdx1P18111 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Cdx1P18111 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC4.76□□□□□ -1.65
Cdx1P18111 Rps29-ps-201ENSMUST00000122083 172 ntBASIC4.76□□□□□ -1.65
Cdx1P18111 Gm3810-201ENSMUST00000122413 476 ntBASIC4.76□□□□□ -1.65
Cdx1P18111 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC4.76□□□□□ -1.65
Cdx1P18111 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC4.76□□□□□ -1.65
Cdx1P18111 Gm25219-201ENSMUST00000157545 330 ntBASIC4.76□□□□□ -1.65
Cdx1P18111 Gm22160-201ENSMUST00000158405 328 ntBASIC4.76□□□□□ -1.65
Cdx1P18111 Gm22530-201ENSMUST00000158820 118 ntBASIC4.76□□□□□ -1.65
Cdx1P18111 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC4.76□□□□□ -1.65
Cdx1P18111 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
Cdx1P18111 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC4.76□□□□□ -1.65
Cdx1P18111 Trbv10-201ENSMUST00000168322 289 ntBASIC4.76□□□□□ -1.65
Cdx1P18111 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC4.76□□□□□ -1.65
Cdx1P18111 Gm20691-201ENSMUST00000176889 333 ntBASIC4.76□□□□□ -1.65
Cdx1P18111 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC4.76□□□□□ -1.65
Cdx1P18111 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
Cdx1P18111 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Cdx1P18111 Gm29664-201ENSMUST00000191125 463 ntBASIC4.76□□□□□ -1.65
Cdx1P18111 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Cdx1P18111 Gm37700-201ENSMUST00000192617 965 ntBASIC4.76□□□□□ -1.65
Cdx1P18111 Gm37135-201ENSMUST00000192652 534 ntBASIC4.76□□□□□ -1.65
Cdx1P18111 Gm19057-201ENSMUST00000194329 1197 ntBASIC4.76□□□□□ -1.65
Cdx1P18111 Igkv4-83-201ENSMUST00000196933 334 ntBASIC4.76□□□□□ -1.65
Cdx1P18111 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC4.76□□□□□ -1.65
Cdx1P18111 AC112680.2-201ENSMUST00000213119 595 ntBASIC4.76□□□□□ -1.65
Cdx1P18111 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC4.76□□□□□ -1.65
Cdx1P18111 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC4.76□□□□□ -1.65
Cdx1P18111 AC102139.1-201ENSMUST00000227000 251 ntBASIC4.76□□□□□ -1.65
Cdx1P18111 AC114572.1-201ENSMUST00000227262 300 ntBASIC4.76□□□□□ -1.65
Cdx1P18111 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Cdx1P18111 Olfr1153-201ENSMUST00000052300 957 ntBASIC4.76□□□□□ -1.65
Cdx1P18111 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC4.76□□□□□ -1.65
Cdx1P18111 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Cdx1P18111 Snord59a-201ENSMUST00000082844 74 ntBASIC4.76□□□□□ -1.65
Cdx1P18111 Gm10205-201ENSMUST00000087431 234 ntBASIC4.76□□□□□ -1.65
Cdx1P18111 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Cdx1P18111 Gm37959-201ENSMUST00000191700 2897 ntBASIC4.76□□□□□ -1.65
Cdx1P18111 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC4.76□□□□□ -1.65
Cdx1P18111 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Cdx1P18111 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Cdx1P18111 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC4.76□□□□□ -1.65
Cdx1P18111 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
Cdx1P18111 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Cdx1P18111 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Cdx1P18111 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Cdx1P18111 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Cdx1P18111 Gm37762-201ENSMUST00000194515 3561 ntBASIC4.75□□□□□ -1.65
Cdx1P18111 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Cdx1P18111 Gm8979-201ENSMUST00000183386 7296 ntBASIC4.75□□□□□ -1.65
Cdx1P18111 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Cdx1P18111 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Cdx1P18111 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Cdx1P18111 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Cdx1P18111 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
Cdx1P18111 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Cdx1P18111 Gm37393-201ENSMUST00000195118 3870 ntBASIC4.75□□□□□ -1.65
Cdx1P18111 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Cdx1P18111 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Cdx1P18111 Gm37363-201ENSMUST00000192336 2233 ntBASIC4.75□□□□□ -1.65
Cdx1P18111 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Cdx1P18111 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC4.75□□□□□ -1.65
Cdx1P18111 Gm11821-201ENSMUST00000117335 979 ntBASIC4.75□□□□□ -1.65
Cdx1P18111 Gm8424-201ENSMUST00000117716 988 ntBASIC4.75□□□□□ -1.65
Cdx1P18111 Gm12849-201ENSMUST00000120013 739 ntBASIC4.75□□□□□ -1.65
Cdx1P18111 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC4.75□□□□□ -1.65
Cdx1P18111 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC4.75□□□□□ -1.65
Cdx1P18111 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC4.75□□□□□ -1.65
Cdx1P18111 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC4.75□□□□□ -1.65
Cdx1P18111 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC4.75□□□□□ -1.65
Cdx1P18111 Scarna10-201ENSMUST00000158992 325 ntBASIC4.75□□□□□ -1.65
Cdx1P18111 Gm20432-201ENSMUST00000173716 250 ntBASIC4.75□□□□□ -1.65
Cdx1P18111 Gm20620-201ENSMUST00000177528 168 ntBASIC4.75□□□□□ -1.65
Cdx1P18111 Gm17048-201ENSMUST00000179266 847 ntBASIC4.75□□□□□ -1.65
Cdx1P18111 n-R5s209-201ENSMUST00000179494 119 ntBASIC4.75□□□□□ -1.65
Cdx1P18111 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Cdx1P18111 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Cdx1P18111 Gm26557-201ENSMUST00000180756 493 ntBASIC4.75□□□□□ -1.65
Cdx1P18111 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC4.75□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms