Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Upk3aQ9JKX8 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
Upk3aQ9JKX8 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
Upk3aQ9JKX8 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC5.46□□□□□ -1.53
Upk3aQ9JKX8 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC5.46□□□□□ -1.53
Upk3aQ9JKX8 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC5.46□□□□□ -1.53
Upk3aQ9JKX8 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC5.46□□□□□ -1.53
Upk3aQ9JKX8 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Upk3aQ9JKX8 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
Upk3aQ9JKX8 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC5.46□□□□□ -1.53
Upk3aQ9JKX8 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Upk3aQ9JKX8 Gm37775-201ENSMUST00000194120 2313 ntBASIC5.46□□□□□ -1.54
Upk3aQ9JKX8 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Upk3aQ9JKX8 Gm13690-201ENSMUST00000118989 285 ntBASIC5.46□□□□□ -1.54
Upk3aQ9JKX8 Gm15741-201ENSMUST00000119401 754 ntBASIC5.46□□□□□ -1.54
Upk3aQ9JKX8 Gm6175-201ENSMUST00000121351 400 ntBASIC5.46□□□□□ -1.54
Upk3aQ9JKX8 Gm11679-201ENSMUST00000121830 779 ntBASIC5.46□□□□□ -1.54
Upk3aQ9JKX8 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC5.46□□□□□ -1.54
Upk3aQ9JKX8 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC5.46□□□□□ -1.54
Upk3aQ9JKX8 Gm23774-201ENSMUST00000158990 131 ntBASIC5.46□□□□□ -1.54
Upk3aQ9JKX8 Gm8837-201ENSMUST00000161037 1107 ntBASIC5.46□□□□□ -1.54
Upk3aQ9JKX8 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC5.46□□□□□ -1.54
Upk3aQ9JKX8 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Upk3aQ9JKX8 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Upk3aQ9JKX8 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Upk3aQ9JKX8 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Upk3aQ9JKX8 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Upk3aQ9JKX8 Gm22993-201ENSMUST00000175423 254 ntBASIC5.46□□□□□ -1.54
Upk3aQ9JKX8 Mir7211-201ENSMUST00000184071 63 ntBASIC5.46□□□□□ -1.54
Upk3aQ9JKX8 Gm8241-201ENSMUST00000189286 816 ntBASIC5.46□□□□□ -1.54
Upk3aQ9JKX8 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC5.46□□□□□ -1.54
Upk3aQ9JKX8 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Upk3aQ9JKX8 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.46□□□□□ -1.54
Upk3aQ9JKX8 Gm7733-201ENSMUST00000199038 919 ntBASIC5.46□□□□□ -1.54
Upk3aQ9JKX8 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC5.46□□□□□ -1.54
Upk3aQ9JKX8 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Upk3aQ9JKX8 AC156802.1-201ENSMUST00000223623 579 ntBASIC5.46□□□□□ -1.54
Upk3aQ9JKX8 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Upk3aQ9JKX8 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Upk3aQ9JKX8 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Upk3aQ9JKX8 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Upk3aQ9JKX8 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Upk3aQ9JKX8 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Upk3aQ9JKX8 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Upk3aQ9JKX8 Gm44242-201ENSMUST00000204212 2721 ntBASIC5.46□□□□□ -1.54
Upk3aQ9JKX8 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
Upk3aQ9JKX8 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Upk3aQ9JKX8 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 Gm43857-201ENSMUST00000200343 3079 ntBASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 Gm37092-201ENSMUST00000193381 1518 ntBASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 Ear-ps2-201ENSMUST00000100689 466 ntBASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 Gm26078-201ENSMUST00000104067 128 ntBASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 Gm14756-201ENSMUST00000116395 240 ntBASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 Gm23839-201ENSMUST00000116957 109 ntBASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 Gm15233-201ENSMUST00000118747 400 ntBASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 Gm13363-201ENSMUST00000122008 522 ntBASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 Gm23233-201ENSMUST00000157301 137 ntBASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 Gm24719-201ENSMUST00000157520 110 ntBASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 Gm22916-201ENSMUST00000157616 119 ntBASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 Gm26170-201ENSMUST00000158419 148 ntBASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 Gm7152-201ENSMUST00000163570 605 ntBASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 Gm38181-201ENSMUST00000181357 720 ntBASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 Mir219c-201ENSMUST00000199860 60 ntBASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 Gm6520-201ENSMUST00000200636 410 ntBASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 Gm44571-201ENSMUST00000208092 533 ntBASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 Gm45870-201ENSMUST00000211269 601 ntBASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 CU024910.1-201ENSMUST00000214310 418 ntBASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 Gm18996-201ENSMUST00000214851 755 ntBASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 AC114572.1-201ENSMUST00000227262 300 ntBASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 n-R5s215-201ENSMUST00000082480 104 ntBASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Upk3aQ9JKX8 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms