Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm18406-201ENSMUST00000185872 669 ntBASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm29197-201ENSMUST00000185922 702 ntBASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm37475-201ENSMUST00000193107 1015 ntBASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm38146-201ENSMUST00000194121 1293 ntBASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm36939-201ENSMUST00000194889 439 ntBASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm37310-201ENSMUST00000195237 2968 ntBASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm36986-201ENSMUST00000195320 353 ntBASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm42580-201ENSMUST00000197223 753 ntBASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm18469-201ENSMUST00000208850 439 ntBASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm18414-201ENSMUST00000210858 694 ntBASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 AC159472.1-201ENSMUST00000218178 463 ntBASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 AC113031.1-201ENSMUST00000227400 432 ntBASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 AC138765.3-201ENSMUST00000227981 423 ntBASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 AC120375.2-202ENSMUST00000228722 397 ntBASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm5612-201ENSMUST00000053326 375 ntBASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm7204-201ENSMUST00000062591 600 ntBASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm22865-201ENSMUST00000083949 214 ntBASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 AC139750.1-201ENSMUST00000223962 1300 ntBASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 AC156636.1-201ENSMUST00000218639 2229 ntBASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm43425-201ENSMUST00000201793 3291 ntBASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm14912-201ENSMUST00000120166 1773 ntBASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm37127-201ENSMUST00000192924 3036 ntBASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm21846-201ENSMUST00000179257 3073 ntBASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Nkx6-1Q99MA9 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Nkx6-1Q99MA9 Gm43410-201ENSMUST00000197510 2234 ntBASIC6.38□□□□□ -1.39
Nkx6-1Q99MA9 Gm36963-201ENSMUST00000193506 2324 ntBASIC6.38□□□□□ -1.39
Nkx6-1Q99MA9 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Nkx6-1Q99MA9 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Nkx6-1Q99MA9 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Nkx6-1Q99MA9 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
Nkx6-1Q99MA9 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Nkx6-1Q99MA9 Gm37420-201ENSMUST00000195332 2912 ntBASIC6.38□□□□□ -1.39
Nkx6-1Q99MA9 Gm26067-201ENSMUST00000103789 110 ntBASIC6.38□□□□□ -1.39
Nkx6-1Q99MA9 Gm22426-201ENSMUST00000103811 96 ntBASIC6.38□□□□□ -1.39
Nkx6-1Q99MA9 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Nkx6-1Q99MA9 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Nkx6-1Q99MA9 Gm14607-201ENSMUST00000119119 491 ntBASIC6.38□□□□□ -1.39
Nkx6-1Q99MA9 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Nkx6-1Q99MA9 Gm11504-201ENSMUST00000120211 173 ntBASIC6.38□□□□□ -1.39
Nkx6-1Q99MA9 Gm13578-201ENSMUST00000120849 590 ntBASIC6.38□□□□□ -1.39
Nkx6-1Q99MA9 Gm14907-201ENSMUST00000121948 854 ntBASIC6.38□□□□□ -1.39
Nkx6-1Q99MA9 Gm8648-201ENSMUST00000122457 221 ntBASIC6.38□□□□□ -1.39
Nkx6-1Q99MA9 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Nkx6-1Q99MA9 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC6.38□□□□□ -1.39
Nkx6-1Q99MA9 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Nkx6-1Q99MA9 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Nkx6-1Q99MA9 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC6.38□□□□□ -1.39
Nkx6-1Q99MA9 Gm22655-201ENSMUST00000174949 96 ntBASIC6.38□□□□□ -1.39
Nkx6-1Q99MA9 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 120.5 ms