Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm17149-201ENSMUST00000164712 375 ntBASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Gm37349-201ENSMUST00000194205 624 ntBASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Gm42580-201ENSMUST00000197223 753 ntBASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Gm43850-201ENSMUST00000202021 578 ntBASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC7.77□□□□□ -1.17
Trim47Q8C0E3 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Gm45226-201ENSMUST00000206602 288 ntBASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Gm4585-201ENSMUST00000207218 452 ntBASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Gm7499-201ENSMUST00000210423 813 ntBASIC7.77□□□□□ -1.17
Trim47Q8C0E3 AC155709.1-201ENSMUST00000218794 162 ntBASIC7.77□□□□□ -1.17
Trim47Q8C0E3 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC7.77□□□□□ -1.17
Trim47Q8C0E3 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC7.77□□□□□ -1.17
Trim47Q8C0E3 CT030238.4-202ENSMUST00000226143 745 ntBASIC7.77□□□□□ -1.17
Trim47Q8C0E3 AC102676.1-201ENSMUST00000228131 719 ntBASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Gm42898-201ENSMUST00000200370 3073 ntBASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC7.77□□□□□ -1.17
Trim47Q8C0E3 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim47Q8C0E3 CT009757.6-201ENSMUST00000220661 2312 ntBASIC7.77□□□□□ -1.17
Trim47Q8C0E3 Icos-202ENSMUST00000102827 3241 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Gm18422-202ENSMUST00000203798 2214 ntBASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Gm18194-202ENSMUST00000210952 3442 ntBASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Efcab7-201ENSMUST00000097959 1713 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Gm14893-201ENSMUST00000117904 282 ntBASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Gm14729-201ENSMUST00000118373 689 ntBASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Gm2199-201ENSMUST00000119065 874 ntBASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Gm15007-201ENSMUST00000119982 710 ntBASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Gm13409-201ENSMUST00000122072 546 ntBASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Gm24418-201ENSMUST00000177597 79 ntBASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Gm24639-201ENSMUST00000178518 79 ntBASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Gm23076-201ENSMUST00000179082 79 ntBASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Gm25077-201ENSMUST00000179157 79 ntBASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim47Q8C0E3 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Gm43675-201ENSMUST00000199468 1184 ntBASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC7.76□□□□□ -1.17
Trim47Q8C0E3 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Gm17987-201ENSMUST00000206902 603 ntBASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Gm7570-201ENSMUST00000215246 698 ntBASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Gm5831-201ENSMUST00000216016 1209 ntBASIC7.76□□□□□ -1.17
Trim47Q8C0E3 AC164436.1-201ENSMUST00000227074 772 ntBASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Gm22364-201ENSMUST00000083097 98 ntBASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Gm23846-201ENSMUST00000083835 107 ntBASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Gm26108-201ENSMUST00000083973 191 ntBASIC7.76□□□□□ -1.17
Trim47Q8C0E3 AC111010.1-203ENSMUST00000227287 1548 ntBASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Sgo1-201ENSMUST00000024736 3628 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Gm37457-201ENSMUST00000193639 2433 ntBASIC7.76□□□□□ -1.17
Trim47Q8C0E3 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Trim47Q8C0E3 AC140280.1-201ENSMUST00000227826 1847 ntBASIC7.75□□□□□ -1.17
Trim47Q8C0E3 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trim47Q8C0E3 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms