Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm28874-201ENSMUST00000190917 3134 ntBASIC7.8□□□□□ -1.16
Col18a1P39061 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Col18a1P39061 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col18a1P39061 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Col18a1P39061 Gm7337-202ENSMUST00000181439 2655 ntBASIC7.8□□□□□ -1.16
Col18a1P39061 Tg-201ENSMUST00000065916 8454 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col18a1P39061 Olfr1189-202ENSMUST00000213679 1983 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Col18a1P39061 Efcab5-201ENSMUST00000108400 4654 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Col18a1P39061 Olfr1-201ENSMUST00000120303 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col18a1P39061 Smco3-201ENSMUST00000068293 2056 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col18a1P39061 Gm6820-201ENSMUST00000188803 2173 ntBASIC7.79□□□□□ -1.16
Col18a1P39061 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Col18a1P39061 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Col18a1P39061 Gm11975-201ENSMUST00000118772 481 ntBASIC7.79□□□□□ -1.16
Col18a1P39061 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Col18a1P39061 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Col18a1P39061 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC7.79□□□□□ -1.16
Col18a1P39061 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Col18a1P39061 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col18a1P39061 Gm17771-201ENSMUST00000194477 1147 ntBASIC7.79□□□□□ -1.16
Col18a1P39061 Gm18255-201ENSMUST00000211316 765 ntBASIC7.79□□□□□ -1.16
Col18a1P39061 Gm19885-201ENSMUST00000212853 343 ntBASIC7.79□□□□□ -1.16
Col18a1P39061 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC7.79□□□□□ -1.16
Col18a1P39061 Gm18329-201ENSMUST00000215832 589 ntBASIC7.79□□□□□ -1.16
Col18a1P39061 AC153505.2-201ENSMUST00000217741 277 ntBASIC7.79□□□□□ -1.16
Col18a1P39061 AC238676.3-201ENSMUST00000223042 154 ntBASIC7.79□□□□□ -1.16
Col18a1P39061 AC108945.1-201ENSMUST00000226477 94 ntBASIC7.79□□□□□ -1.16
Col18a1P39061 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Col18a1P39061 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Col18a1P39061 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC7.79□□□□□ -1.16
Col18a1P39061 Gm24706-201ENSMUST00000082806 137 ntBASIC7.79□□□□□ -1.16
Col18a1P39061 Gm22741-201ENSMUST00000083438 165 ntBASIC7.79□□□□□ -1.16
Col18a1P39061 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Col18a1P39061 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Col18a1P39061 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Col18a1P39061 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC7.79□□□□□ -1.16
Col18a1P39061 CT010514.1-201ENSMUST00000214088 2969 ntBASIC7.79□□□□□ -1.16
Col18a1P39061 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Col18a1P39061 Med13l-202ENSMUST00000201010 7781 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Col18a1P39061 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col18a1P39061 Ppp2r3c-201ENSMUST00000021410 4216 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col18a1P39061 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Col18a1P39061 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col18a1P39061 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col18a1P39061 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col18a1P39061 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Col18a1P39061 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Col18a1P39061 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col18a1P39061 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Col18a1P39061 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Col18a1P39061 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC7.79□□□□□ -1.16
Col18a1P39061 Gm22870-201ENSMUST00000157501 112 ntBASIC7.79□□□□□ -1.16
Col18a1P39061 Gm17655-201ENSMUST00000167969 255 ntBASIC7.79□□□□□ -1.16
Col18a1P39061 Gm18397-201ENSMUST00000176704 587 ntBASIC7.79□□□□□ -1.16
Col18a1P39061 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Col18a1P39061 S100a11-ps-201ENSMUST00000181735 306 ntBASIC7.79□□□□□ -1.16
Col18a1P39061 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC7.79□□□□□ -1.16
Col18a1P39061 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC7.79□□□□□ -1.16
Col18a1P39061 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Col18a1P39061 Gm8291-201ENSMUST00000209635 1261 ntBASIC7.79□□□□□ -1.16
Col18a1P39061 Gm21041-201ENSMUST00000214829 823 ntBASIC7.79□□□□□ -1.16
Col18a1P39061 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Col18a1P39061 Mir129-1-201ENSMUST00000083535 73 ntBASIC7.79□□□□□ -1.16
Col18a1P39061 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Col18a1P39061 Tsc1-202ENSMUST00000113867 7682 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col18a1P39061 Tsc1-201ENSMUST00000028155 7674 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col18a1P39061 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC7.79□□□□□ -1.16
Col18a1P39061 AC144733.2-201ENSMUST00000222552 2292 ntBASIC7.79□□□□□ -1.16
Col18a1P39061 Gm43842-201ENSMUST00000202890 2982 ntBASIC7.79□□□□□ -1.16
Col18a1P39061 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Col18a1P39061 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC7.79□□□□□ -1.16
Col18a1P39061 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Col18a1P39061 Ank3-247ENSMUST00000218680 5500 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Col18a1P39061 Lama5-201ENSMUST00000015791 11388 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col18a1P39061 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col18a1P39061 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Col18a1P39061 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Col18a1P39061 Lca5-201ENSMUST00000034791 4160 ntAPPRIS P4 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col18a1P39061 Gm45191-201ENSMUST00000205846 5439 ntBASIC7.78□□□□□ -1.16
Col18a1P39061 Ahcyl2-203ENSMUST00000115238 5129 ntAPPRIS ALT1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col18a1P39061 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col18a1P39061 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Col18a1P39061 Gm45493-201ENSMUST00000209494 3948 ntBASIC7.78□□□□□ -1.16
Col18a1P39061 Ccdc47-201ENSMUST00000002043 5193 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Col18a1P39061 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Col18a1P39061 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Col18a1P39061 Gm36981-201ENSMUST00000192340 4485 ntBASIC7.78□□□□□ -1.16
Col18a1P39061 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Col18a1P39061 AC159264.1-201ENSMUST00000224844 4257 ntBASIC7.78□□□□□ -1.16
Col18a1P39061 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC7.78□□□□□ -1.16
Col18a1P39061 Thap6-201ENSMUST00000191860 3151 ntBASIC7.78□□□□□ -1.16
Col18a1P39061 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Col18a1P39061 Gm24125-201ENSMUST00000104105 137 ntBASIC7.78□□□□□ -1.16
Col18a1P39061 Gm22657-201ENSMUST00000104197 132 ntBASIC7.78□□□□□ -1.16
Col18a1P39061 Gm14837-201ENSMUST00000119688 206 ntBASIC7.78□□□□□ -1.16
Col18a1P39061 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC7.78□□□□□ -1.16
Col18a1P39061 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC7.78□□□□□ -1.16
Col18a1P39061 Gm23700-201ENSMUST00000158842 102 ntBASIC7.78□□□□□ -1.16
Col18a1P39061 Gm6047-201ENSMUST00000167221 574 ntBASIC7.78□□□□□ -1.16
Col18a1P39061 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC7.78□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms