Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Gm30646-201ENSMUST00000207662 180 ntBASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Gm45316-201ENSMUST00000210128 162 ntBASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Gm4042-201ENSMUST00000216946 637 ntBASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC8.29□□□□□ -1.08
Ube3bQ9ES34 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Gm2754-201ENSMUST00000223383 589 ntBASIC8.29□□□□□ -1.08
Ube3bQ9ES34 AC140209.1-204ENSMUST00000226736 739 ntBASIC8.29□□□□□ -1.08
Ube3bQ9ES34 AC131997.2-201ENSMUST00000227452 362 ntBASIC8.29□□□□□ -1.08
Ube3bQ9ES34 AC163646.2-201ENSMUST00000227962 141 ntBASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Gm5514-201ENSMUST00000060477 306 ntBASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Gm22364-201ENSMUST00000083097 98 ntBASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Muc5ac-202ENSMUST00000155534 10752 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Ube3bQ9ES34 AC165260.6-206ENSMUST00000223884 3698 ntBASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Ube3bQ9ES34 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ube3bQ9ES34 AC125409.2-201ENSMUST00000221888 2158 ntBASIC8.28□□□□□ -1.08
Ube3bQ9ES34 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC8.28□□□□□ -1.08
Ube3bQ9ES34 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Ube3bQ9ES34 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ube3bQ9ES34 Gm45407-201ENSMUST00000209499 3676 ntBASIC8.28□□□□□ -1.08
Ube3bQ9ES34 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Ube3bQ9ES34 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ube3bQ9ES34 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Ube3bQ9ES34 Mir674-201ENSMUST00000102421 100 ntBASIC8.28□□□□□ -1.08
Ube3bQ9ES34 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Ube3bQ9ES34 Gm14352-201ENSMUST00000119250 449 ntBASIC8.28□□□□□ -1.08
Ube3bQ9ES34 Gm4911-201ENSMUST00000119388 945 ntBASIC8.28□□□□□ -1.08
Ube3bQ9ES34 Gm15129-201ENSMUST00000119673 279 ntBASIC8.28□□□□□ -1.08
Ube3bQ9ES34 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC8.28□□□□□ -1.08
Ube3bQ9ES34 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC8.28□□□□□ -1.08
Ube3bQ9ES34 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC8.28□□□□□ -1.08
Ube3bQ9ES34 Gm8338-201ENSMUST00000163928 363 ntBASIC8.28□□□□□ -1.08
Ube3bQ9ES34 Gm23977-201ENSMUST00000177871 74 ntBASIC8.28□□□□□ -1.08
Ube3bQ9ES34 Gm3454-201ENSMUST00000185571 412 ntBASIC8.28□□□□□ -1.08
Ube3bQ9ES34 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Ube3bQ9ES34 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ube3bQ9ES34 Gm43141-201ENSMUST00000199695 274 ntBASIC8.28□□□□□ -1.08
Ube3bQ9ES34 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC8.28□□□□□ -1.08
Ube3bQ9ES34 Gm45226-201ENSMUST00000206602 288 ntBASIC8.28□□□□□ -1.08
Ube3bQ9ES34 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC8.28□□□□□ -1.08
Ube3bQ9ES34 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC8.28□□□□□ -1.08
Ube3bQ9ES34 Gm45739-201ENSMUST00000213094 388 ntBASIC8.28□□□□□ -1.08
Ube3bQ9ES34 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Ube3bQ9ES34 AC135086.1-201ENSMUST00000228621 817 ntBASIC8.28□□□□□ -1.08
Ube3bQ9ES34 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Ube3bQ9ES34 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Ube3bQ9ES34 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Ube3bQ9ES34 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Ube3bQ9ES34 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ube3bQ9ES34 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ube3bQ9ES34 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Ube3bQ9ES34 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC8.28□□□□□ -1.08
Ube3bQ9ES34 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ube3bQ9ES34 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ube3bQ9ES34 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Ube3bQ9ES34 Grik1-210ENSMUST00000228034 2708 ntBASIC8.28□□□□□ -1.08
Ube3bQ9ES34 Gm16758-201ENSMUST00000149552 3848 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Ube3bQ9ES34 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ube3bQ9ES34 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ube3bQ9ES34 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.08
Ube3bQ9ES34 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Ube3bQ9ES34 Pcmtd2-201ENSMUST00000029116 3569 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.08
Ube3bQ9ES34 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Ube3bQ9ES34 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ube3bQ9ES34 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ube3bQ9ES34 AC159264.1-201ENSMUST00000224844 4257 ntBASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Gm5361-201ENSMUST00000211041 1498 ntBASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Gm28333-201ENSMUST00000186034 2168 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Gm28718-201ENSMUST00000188417 2168 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Gm28977-201ENSMUST00000188678 2168 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Gm28315-201ENSMUST00000189948 2168 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Gm29612-201ENSMUST00000191490 2168 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Gm38009-201ENSMUST00000194884 3341 ntBASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ube3bQ9ES34 AC164978.1-201ENSMUST00000228608 4011 ntBASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Gm24473-201ENSMUST00000104483 131 ntBASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Gm2199-201ENSMUST00000119065 874 ntBASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Gm7071-201ENSMUST00000120458 462 ntBASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Gm12880-201ENSMUST00000120652 494 ntBASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Mup-ps17-201ENSMUST00000120723 218 ntBASIC8.27□□□□□ -1.09
Ube3bQ9ES34 Gm12140-201ENSMUST00000121214 544 ntBASIC8.27□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms