Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Snora35-201ENSMUST00000104579 128 ntBASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Gm25507-201ENSMUST00000116981 144 ntBASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Gm8250-201ENSMUST00000117398 774 ntBASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Gm15209-201ENSMUST00000117703 400 ntBASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Gm15502-201ENSMUST00000121449 208 ntBASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Gm12041-201ENSMUST00000121606 602 ntBASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Gm13508-201ENSMUST00000121639 775 ntBASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Gm25219-201ENSMUST00000157545 330 ntBASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Gm5456-201ENSMUST00000170706 844 ntBASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Gm44370-201ENSMUST00000175436 112 ntBASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Gm27854-201ENSMUST00000175578 244 ntBASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Gm17045-201ENSMUST00000178600 844 ntBASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Gm9167-201ENSMUST00000182469 962 ntBASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Gm20885-201ENSMUST00000190192 654 ntBASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Gm21524-201ENSMUST00000190499 696 ntBASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Gm21715-201ENSMUST00000191056 694 ntBASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Gm29740-201ENSMUST00000193182 655 ntBASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Gm36866-201ENSMUST00000193343 657 ntBASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Gm36047-201ENSMUST00000193659 657 ntBASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Ighv1-27-201ENSMUST00000194473 340 ntBASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Gm20857-201ENSMUST00000194766 657 ntBASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Gm20858-201ENSMUST00000195459 657 ntBASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Gm18340-201ENSMUST00000196342 609 ntBASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Gm42753-201ENSMUST00000196718 1268 ntBASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Gm45899-201ENSMUST00000212196 1276 ntBASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Gm7368-201ENSMUST00000213307 367 ntBASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Gm34005-201ENSMUST00000215834 282 ntBASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 AC154329.2-201ENSMUST00000225257 383 ntBASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Mir135a-1-201ENSMUST00000083473 90 ntBASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC6.4□□□□□ -1.38
Nkx6-1Q99MA9 Gm42998-201ENSMUST00000197053 2371 ntBASIC6.4□□□□□ -1.39
Nkx6-1Q99MA9 AC159188.2-201ENSMUST00000224103 1301 ntBASIC6.4□□□□□ -1.39
Nkx6-1Q99MA9 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC6.4□□□□□ -1.39
Nkx6-1Q99MA9 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Nkx6-1Q99MA9 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
Nkx6-1Q99MA9 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Nkx6-1Q99MA9 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Nkx6-1Q99MA9 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Nkx6-1Q99MA9 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Nkx6-1Q99MA9 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Nkx6-1Q99MA9 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Nkx6-1Q99MA9 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Nkx6-1Q99MA9 Gm20644-201ENSMUST00000176721 2063 ntBASIC6.4□□□□□ -1.39
Nkx6-1Q99MA9 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Nkx6-1Q99MA9 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Nkx6-1Q99MA9 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Nkx6-1Q99MA9 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Nkx6-1Q99MA9 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Nkx6-1Q99MA9 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Nkx6-1Q99MA9 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC6.4□□□□□ -1.39
Nkx6-1Q99MA9 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Nkx6-1Q99MA9 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm37790-201ENSMUST00000193136 3346 ntBASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm37090-201ENSMUST00000195694 4105 ntBASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm15950-201ENSMUST00000162902 1973 ntBASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm15078-201ENSMUST00000118371 782 ntBASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm15367-201ENSMUST00000122398 1016 ntBASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm24395-201ENSMUST00000158139 125 ntBASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 Gm26509-201ENSMUST00000180947 948 ntBASIC6.39□□□□□ -1.39
Nkx6-1Q99MA9 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms