Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm28923-201ENSMUST00000187755 322 ntBASIC5.12□□□□□ -1.59
Scrt1Q99M85 Gm4322-201ENSMUST00000191094 336 ntBASIC5.12□□□□□ -1.59
Scrt1Q99M85 Gm38015-201ENSMUST00000193048 188 ntBASIC5.12□□□□□ -1.59
Scrt1Q99M85 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Scrt1Q99M85 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC5.12□□□□□ -1.59
Scrt1Q99M85 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC5.12□□□□□ -1.59
Scrt1Q99M85 Gm2011-203ENSMUST00000203750 435 ntBASIC5.12□□□□□ -1.59
Scrt1Q99M85 Gm4587-201ENSMUST00000209135 637 ntBASIC5.12□□□□□ -1.59
Scrt1Q99M85 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC5.12□□□□□ -1.59
Scrt1Q99M85 Gm45249-201ENSMUST00000211021 348 ntBASIC5.12□□□□□ -1.59
Scrt1Q99M85 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC5.12□□□□□ -1.59
Scrt1Q99M85 AC132384.3-201ENSMUST00000219709 472 ntBASIC5.12□□□□□ -1.59
Scrt1Q99M85 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC5.12□□□□□ -1.59
Scrt1Q99M85 Gm7557-201ENSMUST00000221935 865 ntBASIC5.12□□□□□ -1.59
Scrt1Q99M85 AC154626.1-201ENSMUST00000226070 311 ntBASIC5.12□□□□□ -1.59
Scrt1Q99M85 AC164315.1-201ENSMUST00000226452 708 ntBASIC5.12□□□□□ -1.59
Scrt1Q99M85 AC154806.3-201ENSMUST00000227376 439 ntBASIC5.12□□□□□ -1.59
Scrt1Q99M85 AC154806.4-201ENSMUST00000227406 439 ntBASIC5.12□□□□□ -1.59
Scrt1Q99M85 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Scrt1Q99M85 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Scrt1Q99M85 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Scrt1Q99M85 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Scrt1Q99M85 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Scrt1Q99M85 Gm38137-201ENSMUST00000193735 1401 ntBASIC5.12□□□□□ -1.59
Scrt1Q99M85 Gm43637-201ENSMUST00000202206 2926 ntBASIC5.12□□□□□ -1.59
Scrt1Q99M85 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Scrt1Q99M85 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Scrt1Q99M85 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Scrt1Q99M85 Gm42531-201ENSMUST00000201648 4048 ntBASIC5.12□□□□□ -1.59
Scrt1Q99M85 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Scrt1Q99M85 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Scrt1Q99M85 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Scrt1Q99M85 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC5.11□□□□□ -1.59
Scrt1Q99M85 Gm37137-201ENSMUST00000195138 2684 ntBASIC5.11□□□□□ -1.59
Scrt1Q99M85 Gm43900-201ENSMUST00000204868 2669 ntBASIC5.11□□□□□ -1.59
Scrt1Q99M85 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Scrt1Q99M85 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC5.11□□□□□ -1.59
Scrt1Q99M85 Nsd1-207ENSMUST00000224973 9905 ntBASIC5.11□□□□□ -1.59
Scrt1Q99M85 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC5.11□□□□□ -1.59
Scrt1Q99M85 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC5.11□□□□□ -1.59
Scrt1Q99M85 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC5.11□□□□□ -1.59
Scrt1Q99M85 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Scrt1Q99M85 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Scrt1Q99M85 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
Scrt1Q99M85 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Scrt1Q99M85 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC5.11□□□□□ -1.59
Scrt1Q99M85 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Scrt1Q99M85 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC5.11□□□□□ -1.59
Scrt1Q99M85 Gm14106-201ENSMUST00000119382 438 ntBASIC5.11□□□□□ -1.59
Scrt1Q99M85 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Scrt1Q99M85 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Scrt1Q99M85 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC5.11□□□□□ -1.59
Scrt1Q99M85 Gm22867-201ENSMUST00000157499 109 ntBASIC5.11□□□□□ -1.59
Scrt1Q99M85 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC5.11□□□□□ -1.59
Scrt1Q99M85 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC5.11□□□□□ -1.59
Scrt1Q99M85 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC5.11□□□□□ -1.59
Scrt1Q99M85 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC5.11□□□□□ -1.59
Scrt1Q99M85 Gm18444-201ENSMUST00000191239 629 ntBASIC5.11□□□□□ -1.59
Scrt1Q99M85 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC5.11□□□□□ -1.59
Scrt1Q99M85 Gm37308-201ENSMUST00000194684 100 ntBASIC5.11□□□□□ -1.59
Scrt1Q99M85 Gm43631-201ENSMUST00000202011 369 ntBASIC5.11□□□□□ -1.59
Scrt1Q99M85 Gm44919-201ENSMUST00000208587 1073 ntBASIC5.11□□□□□ -1.59
Scrt1Q99M85 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC5.11□□□□□ -1.59
Scrt1Q99M85 AC151971.3-201ENSMUST00000214694 404 ntBASIC5.11□□□□□ -1.59
Scrt1Q99M85 AC129323.1-201ENSMUST00000216733 470 ntBASIC5.11□□□□□ -1.59
Scrt1Q99M85 AC167222.2-201ENSMUST00000220014 295 ntBASIC5.11□□□□□ -1.59
Scrt1Q99M85 Gm19189-201ENSMUST00000221689 754 ntBASIC5.11□□□□□ -1.59
Scrt1Q99M85 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Scrt1Q99M85 AC154527.1-201ENSMUST00000225809 242 ntBASIC5.11□□□□□ -1.59
Scrt1Q99M85 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Scrt1Q99M85 Gm24200-201ENSMUST00000082955 157 ntBASIC5.11□□□□□ -1.59
Scrt1Q99M85 Gm23502-201ENSMUST00000083902 145 ntBASIC5.11□□□□□ -1.59
Scrt1Q99M85 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Scrt1Q99M85 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Scrt1Q99M85 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Scrt1Q99M85 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC5.11□□□□□ -1.59
Scrt1Q99M85 Gm45311-201ENSMUST00000211086 1330 ntBASIC5.11□□□□□ -1.59
Scrt1Q99M85 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
Scrt1Q99M85 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC5.11□□□□□ -1.59
Scrt1Q99M85 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Scrt1Q99M85 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Scrt1Q99M85 Gm11516-201ENSMUST00000118450 1582 ntBASIC5.11□□□□□ -1.59
Scrt1Q99M85 Olfr1451-202ENSMUST00000207997 1698 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
Scrt1Q99M85 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC5.11□□□□□ -1.59
Scrt1Q99M85 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Scrt1Q99M85 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
Scrt1Q99M85 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Scrt1Q99M85 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Scrt1Q99M85 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Scrt1Q99M85 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Scrt1Q99M85 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
Scrt1Q99M85 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Scrt1Q99M85 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Scrt1Q99M85 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Scrt1Q99M85 Gm15766-201ENSMUST00000118025 813 ntBASIC5.1□□□□□ -1.59
Scrt1Q99M85 Gm14842-201ENSMUST00000119577 269 ntBASIC5.1□□□□□ -1.59
Scrt1Q99M85 Mup-ps19-201ENSMUST00000120390 519 ntBASIC5.1□□□□□ -1.59
Scrt1Q99M85 Gm7670-201ENSMUST00000121272 641 ntBASIC5.1□□□□□ -1.59
Scrt1Q99M85 Gm12685-201ENSMUST00000121702 214 ntBASIC5.1□□□□□ -1.59
Scrt1Q99M85 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms