Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm12850-201ENSMUST00000119210 436 ntBASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Gm13924-201ENSMUST00000119899 486 ntBASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Gm11679-201ENSMUST00000121830 779 ntBASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Gm24179-201ENSMUST00000158925 127 ntBASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Gm16164-201ENSMUST00000160078 468 ntBASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Gm7952-201ENSMUST00000180540 984 ntBASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Mir7212-201ENSMUST00000184098 61 ntBASIC5.5□□□□□ -1.53
Lsm1Q8VC85 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Igkv4-73-201ENSMUST00000199760 358 ntBASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Gm20997-201ENSMUST00000205148 231 ntBASIC5.5□□□□□ -1.53
Lsm1Q8VC85 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Gm19033-201ENSMUST00000208516 964 ntBASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 AC104906.1-201ENSMUST00000218122 913 ntBASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Gm18413-201ENSMUST00000221573 655 ntBASIC5.5□□□□□ -1.53
Lsm1Q8VC85 AC154851.1-201ENSMUST00000221591 655 ntBASIC5.5□□□□□ -1.53
Lsm1Q8VC85 AC165260.3-201ENSMUST00000225101 665 ntBASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Gm25515-201ENSMUST00000083858 157 ntBASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Gm42496-201ENSMUST00000197976 3241 ntBASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Gm19514-201ENSMUST00000206856 4489 ntBASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Gm37370-201ENSMUST00000191996 1410 ntBASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Gm37833-201ENSMUST00000194342 3256 ntBASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Gm37846-201ENSMUST00000191840 3774 ntBASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC5.49□□□□□ -1.53
Lsm1Q8VC85 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Gm15660-201ENSMUST00000118997 478 ntBASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Gm14732-201ENSMUST00000121372 545 ntBASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Gm12732-201ENSMUST00000121688 180 ntBASIC5.49□□□□□ -1.53
Lsm1Q8VC85 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Scarna10-201ENSMUST00000158992 325 ntBASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Gm3344-201ENSMUST00000169610 603 ntBASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC5.49□□□□□ -1.53
Lsm1Q8VC85 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms