Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm29111-201ENSMUST00000188823 696 ntBASIC6.93□□□□□ -1.3
Vps53Q8CCB4 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Vps53Q8CCB4 Gm28584-201ENSMUST00000191489 696 ntBASIC6.93□□□□□ -1.3
Vps53Q8CCB4 Gm37265-201ENSMUST00000191698 885 ntBASIC6.93□□□□□ -1.3
Vps53Q8CCB4 Gm38138-201ENSMUST00000193274 696 ntBASIC6.93□□□□□ -1.3
Vps53Q8CCB4 Gm37991-201ENSMUST00000194297 696 ntBASIC6.93□□□□□ -1.3
Vps53Q8CCB4 Gm44232-201ENSMUST00000204537 225 ntBASIC6.93□□□□□ -1.3
Vps53Q8CCB4 Gm45246-201ENSMUST00000210820 367 ntBASIC6.93□□□□□ -1.3
Vps53Q8CCB4 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC6.93□□□□□ -1.3
Vps53Q8CCB4 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC6.93□□□□□ -1.3
Vps53Q8CCB4 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC6.93□□□□□ -1.3
Vps53Q8CCB4 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC6.93□□□□□ -1.3
Vps53Q8CCB4 AC122393.2-201ENSMUST00000226404 1093 ntBASIC6.93□□□□□ -1.3
Vps53Q8CCB4 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Vps53Q8CCB4 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Vps53Q8CCB4 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Vps53Q8CCB4 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Vps53Q8CCB4 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Vps53Q8CCB4 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Vps53Q8CCB4 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Vps53Q8CCB4 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC6.93□□□□□ -1.3
Vps53Q8CCB4 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
Vps53Q8CCB4 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
Vps53Q8CCB4 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Vps53Q8CCB4 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC6.93□□□□□ -1.3
Vps53Q8CCB4 Gm7155-201ENSMUST00000121143 1671 ntBASIC6.93□□□□□ -1.3
Vps53Q8CCB4 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Vps53Q8CCB4 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Vps53Q8CCB4 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Vps53Q8CCB4 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Vps53Q8CCB4 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC6.92□□□□□ -1.3
Vps53Q8CCB4 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC6.92□□□□□ -1.3
Vps53Q8CCB4 Gm5832-201ENSMUST00000121704 1582 ntBASIC6.92□□□□□ -1.3
Vps53Q8CCB4 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Vps53Q8CCB4 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Vps53Q8CCB4 Mir290a-201ENSMUST00000104627 83 ntBASIC6.92□□□□□ -1.3
Vps53Q8CCB4 Gm11984-201ENSMUST00000118142 766 ntBASIC6.92□□□□□ -1.3
Vps53Q8CCB4 Gm4914-201ENSMUST00000119757 459 ntBASIC6.92□□□□□ -1.3
Vps53Q8CCB4 Gm12768-201ENSMUST00000120055 759 ntBASIC6.92□□□□□ -1.3
Vps53Q8CCB4 Gm11233-201ENSMUST00000122357 634 ntBASIC6.92□□□□□ -1.3
Vps53Q8CCB4 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC6.92□□□□□ -1.3
Vps53Q8CCB4 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Vps53Q8CCB4 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Vps53Q8CCB4 Gm25363-201ENSMUST00000158850 245 ntBASIC6.92□□□□□ -1.3
Vps53Q8CCB4 Gm25445-201ENSMUST00000158996 299 ntBASIC6.92□□□□□ -1.3
Vps53Q8CCB4 Gm6541-201ENSMUST00000165542 561 ntBASIC6.92□□□□□ -1.3
Vps53Q8CCB4 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC6.92□□□□□ -1.3
Vps53Q8CCB4 Mir3572-201ENSMUST00000175549 86 ntBASIC6.92□□□□□ -1.3
Vps53Q8CCB4 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC6.92□□□□□ -1.3
Vps53Q8CCB4 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC6.92□□□□□ -1.3
Vps53Q8CCB4 Gm7713-201ENSMUST00000181201 1007 ntBASIC6.92□□□□□ -1.3
Vps53Q8CCB4 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Vps53Q8CCB4 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Vps53Q8CCB4 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC6.92□□□□□ -1.3
Vps53Q8CCB4 Gm36378-201ENSMUST00000201709 388 ntBASIC6.92□□□□□ -1.3
Vps53Q8CCB4 Gm9269-201ENSMUST00000221661 578 ntBASIC6.92□□□□□ -1.3
Vps53Q8CCB4 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Vps53Q8CCB4 Olfr844-201ENSMUST00000054106 930 ntBASIC6.92□□□□□ -1.3
Vps53Q8CCB4 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Vps53Q8CCB4 Gm43874-201ENSMUST00000204853 2798 ntBASIC6.92□□□□□ -1.3
Vps53Q8CCB4 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Vps53Q8CCB4 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC6.92□□□□□ -1.3
Vps53Q8CCB4 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Vps53Q8CCB4 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Vps53Q8CCB4 Gm45424-201ENSMUST00000210575 3300 ntBASIC6.92□□□□□ -1.3
Vps53Q8CCB4 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
Vps53Q8CCB4 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
Vps53Q8CCB4 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Vps53Q8CCB4 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Vps53Q8CCB4 Gm43588-201ENSMUST00000201862 2298 ntBASIC6.92□□□□□ -1.3
Vps53Q8CCB4 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Vps53Q8CCB4 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Vps53Q8CCB4 Gm15425-201ENSMUST00000119013 2711 ntBASIC6.92□□□□□ -1.3
Vps53Q8CCB4 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Gm37060-201ENSMUST00000194997 2397 ntBASIC6.91□□□□□ -1.3
Vps53Q8CCB4 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Gm4994-201ENSMUST00000118379 2187 ntBASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Gm25345-201ENSMUST00000104505 133 ntBASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Mir466j-201ENSMUST00000116876 122 ntBASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Gm13870-201ENSMUST00000117214 1023 ntBASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Gm14115-201ENSMUST00000119242 482 ntBASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Gm8761-201ENSMUST00000121507 955 ntBASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Gm22932-201ENSMUST00000175510 72 ntBASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC6.91□□□□□ -1.3
Vps53Q8CCB4 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Gm8581-201ENSMUST00000188636 890 ntBASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Gm20770-201ENSMUST00000193474 694 ntBASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC6.91□□□□□ -1.3
Vps53Q8CCB4 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC6.91□□□□□ -1.3
Vps53Q8CCB4 Gm42983-201ENSMUST00000199879 815 ntBASIC6.91□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms