Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Foxp3-202ENSMUST00000115738 3681 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim35Q8C006 Gm10623-201ENSMUST00000209081 2639 ntBASIC8.77□□□□□ -1.01
Trim35Q8C006 C8a-201ENSMUST00000048947 1993 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim35Q8C006 Ubqln3-201ENSMUST00000057254 2376 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim35Q8C006 Etl4-203ENSMUST00000114604 4786 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim35Q8C006 Gm26628-201ENSMUST00000181028 1719 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trim35Q8C006 Scn8a-204ENSMUST00000108909 11436 ntTSL 5 BASIC8.77□□□□□ -1.01
Trim35Q8C006 Ssh2-201ENSMUST00000037912 9178 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim35Q8C006 Gm44013-201ENSMUST00000204392 2262 ntBASIC8.77□□□□□ -1.01
Trim35Q8C006 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim35Q8C006 Srsf5-204ENSMUST00000110354 1489 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
Trim35Q8C006 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
Trim35Q8C006 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Trim35Q8C006 Lyve1-201ENSMUST00000033050 2893 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim35Q8C006 Ctdsp2-201ENSMUST00000105255 4136 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Trim35Q8C006 4930470B04Rik-201ENSMUST00000192005 1926 ntBASIC8.76□□□□□ -1.01
Trim35Q8C006 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim35Q8C006 Sulf1-205ENSMUST00000186051 4563 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Trim35Q8C006 Fam129a-205ENSMUST00000148810 6531 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim35Q8C006 Etfdh-202ENSMUST00000120992 2233 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Trim35Q8C006 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim35Q8C006 Rpgr-203ENSMUST00000073392 2926 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim35Q8C006 4930534H03Rik-201ENSMUST00000216311 1669 ntTSL 5 BASIC8.76□□□□□ -1.01
Trim35Q8C006 Rbx1-201ENSMUST00000023036 1655 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim35Q8C006 Cks1brt-202ENSMUST00000211617 2397 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim35Q8C006 Mettl21e-201ENSMUST00000054801 3211 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim35Q8C006 Sdcbp-204ENSMUST00000108374 1803 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Trim35Q8C006 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Trim35Q8C006 Gm23990-201ENSMUST00000117031 117 ntBASIC8.76□□□□□ -1.01
Trim35Q8C006 Gm11719-201ENSMUST00000119399 351 ntBASIC8.76□□□□□ -1.01
Trim35Q8C006 Gm13680-201ENSMUST00000119790 793 ntBASIC8.76□□□□□ -1.01
Trim35Q8C006 Gm11399-201ENSMUST00000131021 324 ntTSL 5 BASIC8.76□□□□□ -1.01
Trim35Q8C006 Gm12833-201ENSMUST00000136112 477 ntBASIC8.76□□□□□ -1.01
Trim35Q8C006 Gm24991-201ENSMUST00000157405 108 ntBASIC8.76□□□□□ -1.01
Trim35Q8C006 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC8.76□□□□□ -1.01
Trim35Q8C006 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim35Q8C006 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC8.76□□□□□ -1.01
Trim35Q8C006 Gm26970-201ENSMUST00000182990 964 ntBASIC8.76□□□□□ -1.01
Trim35Q8C006 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Trim35Q8C006 Gm28115-201ENSMUST00000188985 360 ntBASIC8.76□□□□□ -1.01
Trim35Q8C006 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Trim35Q8C006 Igkv2-107-201ENSMUST00000196000 313 ntBASIC8.76□□□□□ -1.01
Trim35Q8C006 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC8.76□□□□□ -1.01
Trim35Q8C006 Gm18593-201ENSMUST00000200754 1139 ntBASIC8.76□□□□□ -1.01
Trim35Q8C006 Nsg1-205ENSMUST00000201415 883 ntTSL 5 BASIC8.76□□□□□ -1.01
Trim35Q8C006 Gm45827-201ENSMUST00000211955 311 ntTSL 5 BASIC8.76□□□□□ -1.01
Trim35Q8C006 CT030709.1-201ENSMUST00000214443 443 ntTSL 5 BASIC8.76□□□□□ -1.01
Trim35Q8C006 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC8.76□□□□□ -1.01
Trim35Q8C006 Gm46313-201ENSMUST00000220463 547 ntBASIC8.76□□□□□ -1.01
Trim35Q8C006 Gm46344-201ENSMUST00000220530 887 ntBASIC8.76□□□□□ -1.01
Trim35Q8C006 AC122354.1-201ENSMUST00000222328 702 ntTSL 5 BASIC8.76□□□□□ -1.01
Trim35Q8C006 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim35Q8C006 Prp2-201ENSMUST00000076061 1074 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Trim35Q8C006 Dcp1a-201ENSMUST00000022535 5576 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim35Q8C006 P2rx7-204ENSMUST00000121489 2576 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Trim35Q8C006 Gm37595-201ENSMUST00000192668 1742 ntBASIC8.76□□□□□ -1.01
Trim35Q8C006 CT009757.2-201ENSMUST00000220806 2028 ntBASIC8.76□□□□□ -1.01
Trim35Q8C006 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim35Q8C006 Gm44753-201ENSMUST00000207739 2335 ntTSL 5 BASIC8.76□□□□□ -1.01
Trim35Q8C006 Mgat4a-205ENSMUST00000151952 7251 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim35Q8C006 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Trim35Q8C006 Ap5m1-201ENSMUST00000037473 6321 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim35Q8C006 Gm12263-201ENSMUST00000119105 1482 ntBASIC8.76□□□□□ -1.01
Trim35Q8C006 Gm6733-201ENSMUST00000118302 1920 ntBASIC8.76□□□□□ -1.01
Trim35Q8C006 Arhgef38-203ENSMUST00000161022 1912 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Trim35Q8C006 Fgr-204ENSMUST00000171223 2398 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim35Q8C006 Snx31-201ENSMUST00000013755 2696 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim35Q8C006 Gm44986-201ENSMUST00000206292 2829 ntBASIC8.76□□□□□ -1.01
Trim35Q8C006 Cacna2d4-205ENSMUST00000186622 3710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim35Q8C006 Star-201ENSMUST00000033979 4046 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim35Q8C006 Mast4-212ENSMUST00000171791 7647 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Trim35Q8C006 Synj2-208ENSMUST00000115789 5130 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim35Q8C006 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC8.75□□□□□ -1.01
Trim35Q8C006 Vmn2r53-201ENSMUST00000170412 2421 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Trim35Q8C006 Gm45838-201ENSMUST00000207355 2447 ntBASIC8.75□□□□□ -1.01
Trim35Q8C006 Mkl2-201ENSMUST00000009713 5815 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
Trim35Q8C006 Fgr-201ENSMUST00000030693 3363 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim35Q8C006 Zfp488-201ENSMUST00000166737 4301 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim35Q8C006 Tmem41b-203ENSMUST00000119929 2346 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trim35Q8C006 Gm35572-201ENSMUST00000212427 2310 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trim35Q8C006 Nutm1-201ENSMUST00000043970 3731 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim35Q8C006 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Trim35Q8C006 Gm43200-201ENSMUST00000200385 2161 ntBASIC8.75□□□□□ -1.01
Trim35Q8C006 Gm8728-201ENSMUST00000207367 2178 ntBASIC8.75□□□□□ -1.01
Trim35Q8C006 Gm8486-201ENSMUST00000207508 2171 ntBASIC8.75□□□□□ -1.01
Trim35Q8C006 Gm8685-201ENSMUST00000207567 2183 ntBASIC8.75□□□□□ -1.01
Trim35Q8C006 Gm16443-201ENSMUST00000207909 2184 ntBASIC8.75□□□□□ -1.01
Trim35Q8C006 Pi4kb-203ENSMUST00000125476 3400 ntTSL 5 BASIC8.75□□□□□ -1.01
Trim35Q8C006 Polr1e-204ENSMUST00000133157 2986 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim35Q8C006 Gm9866-203ENSMUST00000182592 8487 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trim35Q8C006 Isy1-201ENSMUST00000089497 5837 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim35Q8C006 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim35Q8C006 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC8.75□□□□□ -1.01
Trim35Q8C006 Abca1-201ENSMUST00000030010 10262 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim35Q8C006 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Trim35Q8C006 Zfp949-203ENSMUST00000161458 3163 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim35Q8C006 D3Ertd254e-202ENSMUST00000197653 6689 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim35Q8C006 Myl7-201ENSMUST00000102921 590 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim35Q8C006 Gm11219-201ENSMUST00000118565 358 ntBASIC8.75□□□□□ -1.01
Trim35Q8C006 Gm11605-201ENSMUST00000120413 646 ntBASIC8.75□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms