Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Shank3Q4ACU6 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Shank3Q4ACU6 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Shank3Q4ACU6 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC7.07□□□□□ -1.28
Shank3Q4ACU6 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC7.06□□□□□ -1.28
Shank3Q4ACU6 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Shank3Q4ACU6 Ralgapa1-212ENSMUST00000226244 8841 ntBASIC7.06□□□□□ -1.28
Shank3Q4ACU6 Kng2-202ENSMUST00000100046 2294 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Shank3Q4ACU6 Gm9866-203ENSMUST00000182592 8487 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Shank3Q4ACU6 AC158982.1-205ENSMUST00000227339 1876 ntBASIC7.06□□□□□ -1.28
Shank3Q4ACU6 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Shank3Q4ACU6 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Shank3Q4ACU6 Akap2-202ENSMUST00000098064 7172 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Shank3Q4ACU6 Gm37127-201ENSMUST00000192924 3036 ntBASIC7.06□□□□□ -1.28
Shank3Q4ACU6 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Shank3Q4ACU6 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC7.06□□□□□ -1.28
Shank3Q4ACU6 Gm22870-201ENSMUST00000157501 112 ntBASIC7.06□□□□□ -1.28
Shank3Q4ACU6 Gm22789-201ENSMUST00000157884 130 ntBASIC7.06□□□□□ -1.28
Shank3Q4ACU6 Scarna13-201ENSMUST00000158164 275 ntBASIC7.06□□□□□ -1.28
Shank3Q4ACU6 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC7.06□□□□□ -1.28
Shank3Q4ACU6 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC7.06□□□□□ -1.28
Shank3Q4ACU6 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Shank3Q4ACU6 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Shank3Q4ACU6 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC7.06□□□□□ -1.28
Shank3Q4ACU6 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC7.06□□□□□ -1.28
Shank3Q4ACU6 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Shank3Q4ACU6 Gm4714-201ENSMUST00000203395 279 ntBASIC7.06□□□□□ -1.28
Shank3Q4ACU6 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC7.06□□□□□ -1.28
Shank3Q4ACU6 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC7.06□□□□□ -1.28
Shank3Q4ACU6 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC7.06□□□□□ -1.28
Shank3Q4ACU6 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
Shank3Q4ACU6 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Shank3Q4ACU6 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Shank3Q4ACU6 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Shank3Q4ACU6 Gm44735-201ENSMUST00000206197 1752 ntBASIC7.06□□□□□ -1.28
Shank3Q4ACU6 Gm38276-201ENSMUST00000192446 1343 ntBASIC7.06□□□□□ -1.28
Shank3Q4ACU6 Ptprj-201ENSMUST00000111493 7124 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Shank3Q4ACU6 Gm45876-201ENSMUST00000212698 2709 ntBASIC7.05□□□□□ -1.28
Shank3Q4ACU6 Scn8a-204ENSMUST00000108909 11436 ntTSL 5 BASIC7.05□□□□□ -1.28
Shank3Q4ACU6 Gm37913-201ENSMUST00000192925 2544 ntBASIC7.05□□□□□ -1.28
Shank3Q4ACU6 Akap2-206ENSMUST00000107598 6830 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Shank3Q4ACU6 Ncbp3-201ENSMUST00000021135 12106 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Shank3Q4ACU6 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Shank3Q4ACU6 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC7.05□□□□□ -1.28
Shank3Q4ACU6 1700007F19Rik-201ENSMUST00000188418 1642 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Shank3Q4ACU6 Krr1-203ENSMUST00000163048 5023 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Shank3Q4ACU6 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Shank3Q4ACU6 Gm15812-201ENSMUST00000162331 748 ntBASIC7.05□□□□□ -1.28
Shank3Q4ACU6 Gm3170-201ENSMUST00000168753 850 ntBASIC7.05□□□□□ -1.28
Shank3Q4ACU6 Gm3348-201ENSMUST00000177813 850 ntBASIC7.05□□□□□ -1.28
Shank3Q4ACU6 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC7.05□□□□□ -1.28
Shank3Q4ACU6 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Shank3Q4ACU6 Gm29474-201ENSMUST00000187688 379 ntBASIC7.05□□□□□ -1.28
Shank3Q4ACU6 Gm29781-201ENSMUST00000203862 478 ntBASIC7.05□□□□□ -1.28
Shank3Q4ACU6 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC7.05□□□□□ -1.28
Shank3Q4ACU6 Gm2099-201ENSMUST00000220979 412 ntBASIC7.05□□□□□ -1.28
Shank3Q4ACU6 AC152169.2-201ENSMUST00000224558 613 ntBASIC7.05□□□□□ -1.28
Shank3Q4ACU6 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Shank3Q4ACU6 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Shank3Q4ACU6 Gm6104-201ENSMUST00000078030 603 ntBASIC7.05□□□□□ -1.28
Shank3Q4ACU6 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Shank3Q4ACU6 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Shank3Q4ACU6 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC7.05□□□□□ -1.28
Shank3Q4ACU6 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Shank3Q4ACU6 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Shank3Q4ACU6 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Shank3Q4ACU6 Zkscan7-201ENSMUST00000063980 4722 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Shank3Q4ACU6 Kif14-203ENSMUST00000189413 8943 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Shank3Q4ACU6 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
Shank3Q4ACU6 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Shank3Q4ACU6 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Shank3Q4ACU6 Gm11912-201ENSMUST00000117235 264 ntBASIC7.04□□□□□ -1.28
Shank3Q4ACU6 Gm25865-201ENSMUST00000158247 104 ntBASIC7.04□□□□□ -1.28
Shank3Q4ACU6 Gm6872-201ENSMUST00000165001 700 ntBASIC7.04□□□□□ -1.28
Shank3Q4ACU6 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC7.04□□□□□ -1.28
Shank3Q4ACU6 Gm37491-201ENSMUST00000192552 1111 ntBASIC7.04□□□□□ -1.28
Shank3Q4ACU6 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC7.04□□□□□ -1.28
Shank3Q4ACU6 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC7.04□□□□□ -1.28
Shank3Q4ACU6 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Shank3Q4ACU6 AC155808.1-201ENSMUST00000219288 409 ntBASIC7.04□□□□□ -1.28
Shank3Q4ACU6 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC7.04□□□□□ -1.28
Shank3Q4ACU6 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Shank3Q4ACU6 Gm23972-201ENSMUST00000083322 165 ntBASIC7.04□□□□□ -1.28
Shank3Q4ACU6 Mir17-201ENSMUST00000083574 84 ntBASIC7.04□□□□□ -1.28
Shank3Q4ACU6 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Shank3Q4ACU6 AL591843.1-201ENSMUST00000223686 3082 ntBASIC7.04□□□□□ -1.28
Shank3Q4ACU6 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Shank3Q4ACU6 Nf1-201ENSMUST00000071325 11917 ntAPPRIS P2 TSL 2 BASIC7.04□□□□□ -1.28
Shank3Q4ACU6 Szt2-201ENSMUST00000075406 10965 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Shank3Q4ACU6 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Shank3Q4ACU6 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC7.04□□□□□ -1.28
Shank3Q4ACU6 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Shank3Q4ACU6 Gm37967-201ENSMUST00000195634 2665 ntBASIC7.04□□□□□ -1.28
Shank3Q4ACU6 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
Shank3Q4ACU6 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC7.04□□□□□ -1.28
Shank3Q4ACU6 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Shank3Q4ACU6 Cfap44-202ENSMUST00000120049 6199 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Shank3Q4ACU6 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Shank3Q4ACU6 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC7.04□□□□□ -1.28
Shank3Q4ACU6 Gm12988-201ENSMUST00000119054 478 ntBASIC7.04□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms