Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col1a1P11087 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Col1a1P11087 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC6.68□□□□□ -1.34
Col1a1P11087 Gm21051-201ENSMUST00000221757 1688 ntBASIC6.68□□□□□ -1.34
Col1a1P11087 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Col1a1P11087 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col1a1P11087 Gm38118-201ENSMUST00000192052 2222 ntBASIC6.68□□□□□ -1.34
Col1a1P11087 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC6.68□□□□□ -1.34
Col1a1P11087 AC155298.1-201ENSMUST00000225350 3250 ntBASIC6.68□□□□□ -1.34
Col1a1P11087 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col1a1P11087 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col1a1P11087 Gm13590-201ENSMUST00000120183 1588 ntBASIC6.68□□□□□ -1.34
Col1a1P11087 Gm36814-201ENSMUST00000197457 1755 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Col1a1P11087 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col1a1P11087 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col1a1P11087 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Col1a1P11087 Mir92b-201ENSMUST00000102300 83 ntBASIC6.67□□□□□ -1.34
Col1a1P11087 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC6.67□□□□□ -1.34
Col1a1P11087 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Col1a1P11087 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC6.67□□□□□ -1.34
Col1a1P11087 Ighv3-2-201ENSMUST00000191842 349 ntBASIC6.67□□□□□ -1.34
Col1a1P11087 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC6.67□□□□□ -1.34
Col1a1P11087 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC6.67□□□□□ -1.34
Col1a1P11087 Gm6070-201ENSMUST00000207275 419 ntBASIC6.67□□□□□ -1.34
Col1a1P11087 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col1a1P11087 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Col1a1P11087 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Col1a1P11087 Map1b-201ENSMUST00000064762 11808 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col1a1P11087 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col1a1P11087 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col1a1P11087 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Col1a1P11087 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col1a1P11087 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Col1a1P11087 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Col1a1P11087 Btk-201ENSMUST00000033617 2540 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col1a1P11087 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col1a1P11087 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col1a1P11087 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col1a1P11087 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col1a1P11087 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Col1a1P11087 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Col1a1P11087 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col1a1P11087 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Col1a1P11087 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col1a1P11087 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC6.67□□□□□ -1.34
Col1a1P11087 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col1a1P11087 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Col1a1P11087 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC6.67□□□□□ -1.34
Col1a1P11087 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Col1a1P11087 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col1a1P11087 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC6.66□□□□□ -1.34
Col1a1P11087 n-R5s82-201ENSMUST00000104213 109 ntBASIC6.66□□□□□ -1.34
Col1a1P11087 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col1a1P11087 Gm13033-201ENSMUST00000117591 1057 ntBASIC6.66□□□□□ -1.34
Col1a1P11087 Gm15187-201ENSMUST00000122329 264 ntBASIC6.66□□□□□ -1.34
Col1a1P11087 Gm23211-201ENSMUST00000122717 308 ntBASIC6.66□□□□□ -1.34
Col1a1P11087 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC6.66□□□□□ -1.34
Col1a1P11087 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Col1a1P11087 Gm5353-201ENSMUST00000139800 793 ntBASIC6.66□□□□□ -1.34
Col1a1P11087 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC6.66□□□□□ -1.34
Col1a1P11087 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC6.66□□□□□ -1.34
Col1a1P11087 Gm17994-201ENSMUST00000209260 533 ntBASIC6.66□□□□□ -1.34
Col1a1P11087 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC6.66□□□□□ -1.34
Col1a1P11087 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC6.66□□□□□ -1.34
Col1a1P11087 AC116724.1-201ENSMUST00000227900 972 ntBASIC6.66□□□□□ -1.34
Col1a1P11087 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col1a1P11087 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Col1a1P11087 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Col1a1P11087 Gm16415-201ENSMUST00000080097 489 ntBASIC6.66□□□□□ -1.34
Col1a1P11087 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC6.66□□□□□ -1.34
Col1a1P11087 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Col1a1P11087 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col1a1P11087 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC6.66□□□□□ -1.34
Col1a1P11087 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col1a1P11087 Gm38377-201ENSMUST00000193253 3772 ntBASIC6.66□□□□□ -1.34
Col1a1P11087 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Col1a1P11087 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col1a1P11087 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col1a1P11087 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Col1a1P11087 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col1a1P11087 Gm37278-201ENSMUST00000191619 2872 ntBASIC6.66□□□□□ -1.34
Col1a1P11087 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Col1a1P11087 Gm37967-201ENSMUST00000195634 2665 ntBASIC6.66□□□□□ -1.34
Col1a1P11087 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col1a1P11087 Gm37078-201ENSMUST00000193314 2009 ntBASIC6.66□□□□□ -1.34
Col1a1P11087 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Col1a1P11087 Gm22778-201ENSMUST00000104090 128 ntBASIC6.66□□□□□ -1.34
Col1a1P11087 Gm15560-201ENSMUST00000117107 643 ntBASIC6.66□□□□□ -1.34
Col1a1P11087 Gm11975-201ENSMUST00000118772 481 ntBASIC6.66□□□□□ -1.34
Col1a1P11087 Gm20453-201ENSMUST00000173968 226 ntBASIC6.66□□□□□ -1.34
Col1a1P11087 Gm27754-201ENSMUST00000183340 126 ntBASIC6.66□□□□□ -1.34
Col1a1P11087 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Col1a1P11087 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC6.66□□□□□ -1.34
Col1a1P11087 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Col1a1P11087 Gm9278-201ENSMUST00000205508 553 ntBASIC6.66□□□□□ -1.34
Col1a1P11087 Gm44984-201ENSMUST00000207802 394 ntBASIC6.66□□□□□ -1.34
Col1a1P11087 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC6.66□□□□□ -1.34
Col1a1P11087 AC211878.2-201ENSMUST00000222486 488 ntBASIC6.66□□□□□ -1.34
Col1a1P11087 AC096628.1-201ENSMUST00000226060 641 ntBASIC6.66□□□□□ -1.34
Col1a1P11087 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms